Using-Fidle/Linux-installation-with-pip.md

-[<img src="uploads/b78708ab8609c803fced7b5c6c86096f/00-fidle-header-03.svg">](home)
-
 
 **- Notes -**
-- This installation procedure is based on the official Tensorflow and PyTorch procedure, <br>which are described here : 
-<https://www.tensorflow.org/install/pip> and <https://pytorch.org/>
-- If you have a **GPU card**, things can be more complicated than this simplified procedure. <br>We advise you to consult the documentation mentioned above.
+
+- This installation procedure is based on the official Tensorflow and PyTorch procedure, \
+  which are described here : https://www.tensorflow.org/install/pip and https://pytorch.org/
+- If you have a **GPU card**, things can be more complicated than this simplified procedure. \
+  We advise you to consult the documentation mentioned above.
 - All commands presented below and prefixed by `$` are to be launched on a terminal/unix console.
 - `(fidle-env) $` is the fidle-env python prompt
 - Size a full installation (environment, data, notebooks) is **around 8GB**
@@ -20,24 +20,27 @@
 A version of **python 3.6 to 3.9** is required.
 
 **Note :**
+
 - **Do not download the latest version 3.11 !**
 
 For example, if you are root (administrator in your Linux system) under Debian :
 
-```
+```plaintext
 sudo apt-get install python3 python3-dev python3-pip python3-venv
 ```
+
 ## 2 - A folder to contain them all
 
 The idea is to put everything in the same folder, for example `fidle-tp`
 
-```
+```plaintext
 $ mkdir ~/fidle-tp
 $ cd ~/fidle-tp
 ```
+
 ## 3 - A python environment, just for us !
 
-The idea is to create a virtual python environment, in order not to "pollute" your system.  
+The idea is to create a virtual python environment, in order not to "pollute" your system.\
 This virtual environment will be contained in a sub folder (fidle-env).
 
 To create a virtual environment "fidle-env" and activate it:
@@ -50,24 +53,48 @@ $ source ./fidle-env/bin/activate
 We can now install all the necessary modules in our python environment :
 
 ```plaintext
-(fidle-env) $ pip install --upgrade tensorflow==2.12 torch torchvision lightning Scikit-image imageio pillow==10.0.0 Scikit-learn Matplotlib plotly barviz numpy==1.23.3 Pandas Pandoc pyyaml Jupyterlab fidle
-
+(fidle-env) $ pip install --extra-index-url https://download.pytorch.org/whl/cpu \
+                          torch             \
+                          torchvision       \
+                          torch-geometric   \
+                          torchtext         \
+                          torchdata         \
+                          lightning         \
+                          tensorboard       \
+                          keras             \
+                          transformers      \
+                          numpy             \
+                          Scikit-image      \
+                          Scikit-learn      \
+                          Matplotlib        \
+                          plotly            \
+                          seaborn           \
+                          barviz            \
+                          pyarrow           \
+                          Pandas            \
+                          Pandoc            \
+                          pyyaml            \
+                          Jupyterlab        \
+                          fidle
 ```
 
 It will take a little while, but should go very well :-)
 
 ## 4 - Install notebooks et datasets
 
-Now all that remains is to install the notebooks and datasets :-)  
+Now all that remains is to install the notebooks and datasets :-)\
 Nous allons faire cela avec la commande `fid` de Fidle.
 
 Toujours depuis notre dossier `fidle-tp`
-```
+
+```plaintext
 (fidle-env) $ fid install --quiet
 ```
-You should have something like :  
+
+You should have something like :\
 (version numbers may vary)
-```
+
+```plaintext
 ==========================================================
 fid - Your favorite Fidle admin command :-)    (v2.2b10)
 ==========================================================
@@ -93,6 +120,7 @@ Done.
 ## 5 - Installation check
 
 The tree structure is normally as follows:
+
 ```plaintext
  fidle-tp
      ├── fidle-master-2.2.4    Contains notebooks
@@ -100,17 +128,19 @@ The tree structure is normally as follows:
      └── fidle-env             Virtual environment
 ```
 
-**From a terminal**, go to your `fidle-tp` folder,  
+**From a terminal**, go to your `fidle-tp` folder,\
 activate the `fidle-env` environment and do a `fid check`.
-```
+
+```plaintext
 $ cd (...)/fidle-tp
 $ source ./fidle-env/bin/activate
 (fidle-env) $ fid check
 ```
 
-You should have something like :  
+You should have something like :\
 (version numbers may vary)
-```
+
+```plaintext
 ==========================================================
 fid - Your favorite Fidle admin command :-)    (v2.2b10)
 ==========================================================
@@ -149,19 +179,20 @@ Check environment :
 
 ## 6 - Start Jupyter lab
 
-Very easy :-)  
-**From a terminal**, go to your `fidle-tp` folder,  
+Very easy :-)\
+**From a terminal**, go to your `fidle-tp` folder,\
 activate the `fidle-env` environment and do a `jupyter lab`.
 
-```
+```plaintext
 $ cd (...)/fidle-tp
 $ source ./fidle-env/bin/activate
 (fidle-env) $ jupyter lab
 ```
 
 **Note:**
+
 - You can reinstall notebooks or datasets with the `fid install_notebooks` and `fid install_datasets` commands
-- You can also locate the datasets fidle folder anywhere you want.  
+- You can also locate the datasets fidle folder anywhere you want.\
   In this case, you must specify the location of this folder with the environment variable `FIDLE_DATASETS_DIR`
 
 [Back to the install procedure](Using%20Fidle/install%20fidle)