[ci skip] update dockerfile for ubunutu

ci/docker_images/ubuntu/#Dockerfile#

-FROM ubuntu:14.04.2
-MAINTAINER guido.stevens@cosent.net
-# we need ruby>2.0.0 for jekyll>3.0.0
-RUN apt-get update && apt-get install -y software-properties-common && apt-add-repository -y ppa:brightbox/ruby-ng
-RUN apt-get update && apt-get install -y \
-    curl \
-        firefox \
-	    gcc \
-	        gettext \
-		    ghostscript \
-		        git-core \
-			    graphicsmagick \
-			        jed \
-				    libenchant-dev \
-				        libffi-dev \
-					    libfreetype6-dev \
-					        libjpeg-dev \
-						    libreoffice \
-						        libxslt1-dev \
-							    make \
-							        pdftk \
-								    poppler-data \
-								        poppler-utils \
-									    python-dev \
-									        python-gdbm \
-										    python-lxml \
-										        python-pip \
-											    python-tk \
-											        python-virtualenv \
-												    redis-server \
-												        ruby2.3 \
-													    ruby2.3-dev \
-													        wget \
-														    xvfb \
-														        zlib1g-dev
-															RUN gem install docsplit
-															RUN locale-gen en_US.UTF-8 nl_NL@euro
-															COPY buildout.d /tmp/buildout.d
-															COPY buildout.cfg /tmp/
-															COPY requirements.txt /tmp/
-															RUN cd /tmp && \
-															    wget https://launchpad.net/plone/5.0/5.0.4/+download/Plone-5.0.4-UnifiedInstaller.tgz && \
-															        tar xzf Plone-5.0.4-UnifiedInstaller.tgz && \
-																    tar xjf Plone-5.0.4-UnifiedInstaller/packages/buildout-cache.tar.bz2 && \
-																        mv buildout-cache/* /var/tmp/ && \
-																	    mkdir /var/tmp/extends && \
-																	        rm -rf Plone* buildout-cache
-																		RUN mkdir /tmp/build && cd /tmp/build && \
-																		    cp -r /tmp/buildout.* /tmp/requirements.txt . && \
-																		        virtualenv -p python2.7 . && \
-																			    bin/pip install -r requirements.txt && \
-																			        bin/buildout -c buildout.cfg && \
-																				    chmod -R a+rwX /var/tmp/eggs /var/tmp/downloads /var/tmp/extends && \
-																				        cd /tmp && rm -rf /tmp/build
-																					CMD ["/bin/bash"]# This is a comment
-FROM ubuntu:14.04
-MAINTAINER Franck Pérignon <Franck.Perignon@imag.fr>
-RUN apt-get update && apt-get install -y cmake
\ No newline at end of file

ci/docker_images/ubuntu/Dockerfile

@@ -4,6 +4,7 @@ MAINTAINER Franck.Perignon@imag.fr
 # we need cmake, python ...
 RUN apt-get update && apt-get install -y \
 	cmake\
+	ssh\
 	python-dev\
 	libblas-dev\
         python\
@@ -19,6 +20,7 @@ RUN apt-get update && apt-get install -y \
 	openmpi-bin\
 	libopenmpi-dev\
 	libhdf5-openmpi-dev\
+	cython\
 	python-numpy\
 	python-scipy\
 	python-pyopencl\
@@ -26,18 +28,23 @@ RUN apt-get update && apt-get install -y \
 	libfftw3-dev\
 	libfftw3-mpi-dev\
 	python-pytest\
-	cython
+	wget && \
+	rm -rf /var/lib/apt/lists/*
 RUN pip install --upgrade pip
 RUN pip install --upgrade setuptools
 RUN pip install mpi4py
 RUN pip install sphinx
 RUN pip install wheel
-RUN wget https://pypi.python.org/packages/22/82/64dada5382a60471f85f16eb7d01cc1a9620aea855cd665609adf6fdbb0d/h5py-2.6.0.tar.gz
-RUN tar -zxvf h5py-2.6.0.tar.gz
-RUN cd h5py-2.6.0
-RUN export CC=mpicc
-RUN python setup.py configure --mpi --hdf5=/usr/
-RUN python setup.py install
+RUN wget https://pypi.python.org/packages/22/82/64dada5382a60471f85f16eb7d01cc1a9620aea855cd665609adf6fdbb0d/h5py-2.6.0.tar.gz && \
+	tar -zxvf h5py-2.6.0.tar.gz && \
+	cd h5py-2.6.0 && \
+	export CC=mpicc && \
+	export CFLAGS="-I/usr/include/hdf5/openmpi/"&& \
+	export LDFLAGS="-L /usr/lib/x86_64-linux-gnu/hdf5/openmpi/"&& \
+	python setup.py configure --mpi --hdf5=/usr/ && \
+	python setup.py install && \
+	cd .. && \
+	rm -rf h5py-2.6.0*
 RUN cd ..
 
 CMD ["/bin/bash"]