Commits · noBorders · ttk / spam

02 Oct, 2020 2 commits
- skip ddic labels whose deformed state is wholly outside the image · c8b133d1
  Edward Andò authored Oct 02, 2020
  
  c8b133d1
- skip ddic labels whose deformed state is wholly outside the image · eae598ad
  Edward Andò authored Oct 02, 2020
  
  eae598ad
25 Sep, 2020 7 commits
- ldic working and tests passing · 75f7113a
  Edward Andò authored Sep 25, 2020
  
  75f7113a
- sketch of spam-ldic with slicePadded but not yet working fine · bf50a8d5
  Edward Andò authored Sep 25, 2020
  
  bf50a8d5
- slicePadded in spam-ddic + tests · 3713ab91
  Edward Andò authored Sep 25, 2020
  
  3713ab91
- implementing slicePadded in spam-ddic, should solve all cases of RS=-5 · 56144098
  Edward Andò authored Sep 25, 2020
  
  56144098
- commenting getLabel · c0269bb0
  Edward Andò authored Sep 25, 2020
  
  c0269bb0
- Merge branch 'master' into noBorders · 1eab193f
  Edward Andò authored Sep 25, 2020
  
  1eab193f
- small safety improvement in slicePadded() · 8d3e67ed
  Edward Andò authored Sep 25, 2020
  
  8d3e67ed
23 Sep, 2020 5 commits
- Resolved #170 (doc issue) · b294c250
  Edward Andò authored Sep 23, 2020
  
  b294c250
- return nan when the padded slice doesn't touch the image · 2d18e183
  Olga Stamati authored Sep 23, 2020
  
  2d18e183
- helper function of padding inside label · 4ffdd099
  Olga Stamati authored Sep 23, 2020
  
  4ffdd099
- add helper function for extracting a padded slice and test · f37f2a99
  Olga Stamati authored Sep 23, 2020
  
  f37f2a99
- fix identation error in initial registration for spam-ldic · ac2e202e
  Olga Stamati authored Sep 23, 2020
  
  ac2e202e
18 Sep, 2020 4 commits
- drop mpi4py as necessary dependency, hide import behind a try statement for ldic and ddic · 344d6987
  Edward Andò authored Sep 18, 2020
  
  344d6987
- [skip-ci] imShowProgress detail in examples · 6a8a4837
  Edward Andò authored Sep 18, 2020
  
  6a8a4837
- [skip-ci] let's just remove the print · 30ecf179
  Edward Andò authored Sep 18, 2020
  
  30ecf179
- Minor change to verbose registerMultiscale · a4f9cc2c
  Gustavo Pinzon authored Sep 18, 2020
  
  a4f9cc2c
17 Sep, 2020 6 commits
- Resolves #181 : multiscale implemented for initial registration in spam-ldic... · bc2be1c5
  Edward Andò authored Sep 17, 2020
```
Resolves #181 : multiscale implemented for initial registration in spam-ldic and spam-ddic (-regb -> -regbb to -regbe) as well as multiscale for the labels in spam-ddic (-lcmsb)
```
  bc2be1c5
- lower in plot for MMR example · a3935ec9
  Edward Andò authored Sep 17, 2020
  
  a3935ec9
- Resolves #178 -- mask coverage implemented correctly inn grid() · 8846432d
  Edward Andò authored Sep 17, 2020
  
  8846432d
- Resolves issue #177 -- registerMultiscale handles im1mask and check on returnStatus · 847e927e
  Edward Andò authored Sep 17, 2020
  
  847e927e
- merging ddic-debug -- there is now a debug mode for ddic, its correlation is... · 378cc4ed
  Edward Andò authored Sep 17, 2020
```
merging ddic-debug -- there is now a debug mode for ddic, its correlation is by default rigid, and there is a new spam-ereg-discrete that helps align label manually
```
  378cc4ed
- option to not mask other labels in spam-ddic · 5764bd18
  Edward Andò authored Sep 17, 2020
  
  5764bd18
02 Sep, 2020 1 commit
- Clarifying spam-moveGrains options · 384f67ff
  Edward Andò authored Sep 02, 2020
  
  384f67ff
31 Aug, 2020 1 commit
- safer calculation of node spacing from an ldic field · c5c32d88
  Olga Stamati authored Aug 31, 2020
  
  c5c32d88
29 Aug, 2020 1 commit
- Add rotation symbols to ereg since I always get the direction wrong · 38777ebf
  Edward Andò authored Aug 29, 2020
  
  38777ebf
28 Aug, 2020 2 commits
- force type int in args parser · 0a5e1897
  Olga Stamati authored Aug 28, 2020
  
  0a5e1897
- add how to cite in docs · b1f8a1d0
  Olga Stamati authored Aug 28, 2020
  
  b1f8a1d0
21 Aug, 2020 3 commits
- resolves #175 · fcb024ba
  Edward Andò authored Aug 21, 2020
  
  fcb024ba
- Resolves #176 · ee68cc8a
  Edward Andò authored Aug 21, 2020
  
  ee68cc8a
- adding the script... · ca996b62
  Edward Andò authored Aug 21, 2020
  
  ca996b62
20 Aug, 2020 1 commit
- adding spam-ereg-discrete, improvements to spam-ddic debug mode · d6b891ea
  Edward Andò authored Aug 20, 2020
  
  d6b891ea
19 Aug, 2020 2 commits
- verbose option for contactOrientation (too much output) · f442d29e
  Gustavo Pinzon authored Aug 19, 2020
  
  f442d29e
- Change in the peak distance of contactOrientation · 187108b3
  Gustavo Pinzon authored Aug 19, 2020
  
  187108b3
14 Aug, 2020 4 commits
- default value · 57506705
  Edward Andò authored Aug 14, 2020
  
  57506705
- improvements in ddic and ZYX view in register() · 9de391fe
  Edward Andò authored Aug 14, 2020
  
  9de391fe
- defaults for ereg class · 50141258
  Edward Andò authored Aug 14, 2020
  
  50141258
- Add mode for masking labels again after label dilate + test · 93f6ce0e
  Edward Andò authored Aug 14, 2020
  
  93f6ce0e
10 Aug, 2020 1 commit
- fixUndersegmentation import label · 7db1289f
  Edward Andò authored Aug 10, 2020
  
  7db1289f