Connecting up PhiInit in spam-reg

scripts/spam-reg

@@ -70,10 +70,14 @@ if args.PHIFILE is not None:
         #print("\tI read a registration from a file in binning {} at centre {} at this scale".format(args.PHIFILE_BIN_RATIO, regCentre) )
         print("\tI read a registration from a file in binning {}".format(args.PHIFILE_BIN_RATIO))
 
+        decomposedPhiInit = spam.deformation.decomposePhi(PhiInit)
+
         print("\tTranslations (px)")
-        print("\t\t", spam.deformation.decomposePhi(PhiInit)['t'])
+        print("\t\t", decomposedPhiInit['t'])
         print("\tRotations (deg)")
-        print("\t\t", spam.deformation.decomposePhi(PhiInit)['r'])
+        print("\t\t", decomposedPhiInit['r'])
+        print("\tZoom")
+        print("\t\t", decomposedPhiInit['z'])
 
     # If the read F-file contains multiple lines it's an F field!
     else:
@@ -92,6 +96,7 @@ regReturns = spam.DIC.correlate.registerMultiscale(im1,
                                                    im2,
                                                    args.BIN_BEGIN, binStop=args.BIN_END,
                                                    margin=args.MARGIN,
+                                                   PhiInit=PhiInit,
                                                    PhiRigid=args.RIGID,
                                                    im1mask=im1mask,
                                                    interpolationOrder=args.INTERPOLATION_ORDER,