preparing for coverage in pages

.coveragerc

+[report]
+exclude_lines =
+    # no cover
+    if debug:
+    if graphShow:
+    if GRAPH:
+
+
+[run]
+omit =
+     */_*
+
+source =
+     radioSphere
+
+concurrency = multiprocessing
+
+[html]
+directory = coverage

.gitlab-ci.yml

@@ -7,6 +7,7 @@ test:
   - DEBIAN_FRONTEND=noninteractive apt-get install -y build-essential gcc cmake python3-pip python3 python3-dev libeigen3-dev
   - pip3 install -U -r requirements.txt
   - python3 setup.py install
+  #- python setup.py test
   - sphinx-build -b html docs/source public
   only:
   - branches
@@ -23,6 +24,7 @@ pages:
   - sphinx-build -b html docs/source public
   # - conda build .
   # - tar --exclude='.[^/]*' -czvf public/radioSphere.tar.gz .
+  # -pytest --cov-report html --cov=radioSphere tests/
 
   artifacts:
     paths:

tests/test_cleaner.py

@@ -9,7 +9,7 @@ from scipy.spatial import distance
 import numpy
 import tifffile
 
-plt.style.use('./tools/radioSphere.mplstyle')
+#plt.style.use('./tools/radioSphere.mplstyle')
 
 zoomLevel = 10
 sourceObjectDistMM = 20.0
@@ -127,4 +127,4 @@ dumpfolder = '~/code/NDDEM/Samples/radioSphere/'
 # write_dumpfile(positionsXYZmmClean,radiiMM,2,dumpfolder=dumpfolder)
 
 
-plt.show()
+#plt.show()