From 4c6e3cb60682c77c1103fc14687f5eac25648111 Mon Sep 17 00:00:00 2001
From: Jean-Luc Parouty <Jean-Luc.Parouty@grenoble-inp.fr>
Date: Sun, 13 Dec 2020 22:16:04 +0100
Subject: [PATCH] Update index generator for README
---
README.ipynb | 11 ++--
README.md | 9 +--
READMEv2.ipynb | 119 ++++++++++++++++++++++++++++++++++
fidle/Update_index.ipynb | 2 +-
fidle/img/00-Datasets-tar.svg | 1 +
fidle/img/00-Notebooks.svg | 1 +
6 files changed, 133 insertions(+), 10 deletions(-)
create mode 100644 READMEv2.ipynb
create mode 100644 fidle/img/00-Datasets-tar.svg
create mode 100644 fidle/img/00-Notebooks.svg
diff --git a/README.ipynb b/README.ipynb
index 9b86b75..303957e 100644
--- a/README.ipynb
+++ b/README.ipynb
@@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "code",
- "execution_count": 7,
+ "execution_count": 2,
"metadata": {
"jupyter": {
"source_hidden": true
@@ -42,11 +42,12 @@
"\n",
"\n",
"## Course materials\n",
- "**[<img width=\"50px\" src=\"fidle/img/00-Fidle-pdf.svg\"></img>\n",
- "Get the course slides](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)** \n",
"\n",
- "[How to get and install](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/Install-Fidle) notebooks and datasets \n",
- "Some other useful informations are also available in the [wiki](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/home)\n",
+ "| | | |\n",
+ "|:--:|:--:|:--:|\n",
+ "| **[<img width=\"50px\" src=\"fidle/img/00-Fidle-pdf.svg\"></img><br>Course slides](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**<br>The course in pdf format<br>(12 Mo)| **[<img width=\"50px\" src=\"fidle/img/00-Notebooks.svg\"></img><br>Notebooks](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/archive/master/fidle-master.zip)**<br> Get a Zip or clone this repository <br>(10 Mo)| **[<img width=\"50px\" src=\"fidle/img/00-Datasets-tar.svg\"></img><br>Datasets](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**<br>All the needed datasets<br>(1.2 Go)|\n",
+ "\n",
+ "Have a look about **[How to get and install](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/Install-Fidle)** these notebooks and datasets.\n",
"\n",
"\n",
"## Jupyter notebooks\n",
diff --git a/README.md b/README.md
index 91016f9..f67751a 100644
--- a/README.md
+++ b/README.md
@@ -28,11 +28,12 @@ Current Version : <!-- VERSION_BEGIN -->
## Course materials
-**[<img width="50px" src="fidle/img/00-Fidle-pdf.svg"></img>
-Get the course slides](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**
-[How to get and install](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/Install-Fidle) notebooks and datasets
-Some other useful informations are also available in the [wiki](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/home)
+| | | |
+|:--:|:--:|:--:|
+| **[<img width="50px" src="fidle/img/00-Fidle-pdf.svg"></img><br>Course slides](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**<br>The course in pdf format<br>(12 Mo)| **[<img width="50px" src="fidle/img/00-Notebooks.svg"></img><br>Notebooks](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/archive/master/fidle-master.zip)**<br> Get a Zip or clone this repository <br>(10 Mo)| **[<img width="50px" src="fidle/img/00-Datasets-tar.svg"></img><br>Datasets](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**<br>All the needed datasets<br>(1.2 Go)|
+
+Have a look about **[How to get and install](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/Install-Fidle)** these notebooks and datasets.
## Jupyter notebooks
diff --git a/READMEv2.ipynb b/READMEv2.ipynb
new file mode 100644
index 0000000..dc44792
--- /dev/null
+++ b/READMEv2.ipynb
@@ -0,0 +1,119 @@
+{
+ "cells": [
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "<a name=\"top\"></a>\n",
+ "\n",
+ "[<img width=\"600px\" src=\"fidle/img/00-Fidle-titre-01.svg\"></img>](#top)\n",
+ "\n",
+ "<!-- --------------------------------------------------- -->\n",
+ "<!-- To correctly view this README under Jupyter Lab -->\n",
+ "<!-- Open the notebook: README.ipynb! -->\n",
+ "<!-- --------------------------------------------------- -->\n",
+ "\n",
+ "\n",
+ "## A propos\n",
+ "\n",
+ "This repository contains all the documents and links of the **Fidle Training** . \n",
+ "Fidle (for Formation Introduction au Deep Learning) is a 2-day training session \n",
+ "co-organized by the Formation Permanente CNRS and the SARI and DEVLOG networks. \n",
+ "\n",
+ "The objectives of this training are :\n",
+ " - Understanding the **bases of Deep Learning** neural networks\n",
+ " - Develop a **first experience** through simple and representative examples\n",
+ " - Understanding **Tensorflow/Keras** and **Jupyter lab** technologies\n",
+ " - Apprehend the **academic computing environments** Tier-2 or Tier-1 with powerfull GPU\n",
+ "\n",
+ "For more information, you can contact us at : \n",
+ "[<img width=\"200px\" style=\"vertical-align:middle\" src=\"fidle/img/00-Mail_contact.svg\"></img>](#top) \n",
+ "Current Version : <!-- VERSION_BEGIN -->\n",
+ "0.6.0 DEV\n",
+ "<!-- VERSION_END -->\n",
+ "\n",
+ "\n",
+ "## Course materials\n",
+ "\n",
+ "| | | |\n",
+ "|:--:|:--:|:--:|\n",
+ "| **[<img width=\"50px\" src=\"fidle/img/00-Fidle-pdf.svg\"></img><br>Course slides](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**<br>The course in pdf format<br>(12 Mo)| **[<img width=\"50px\" src=\"fidle/img/00-Notebooks.svg\"></img><br>Notebooks](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/archive/master/fidle-master.zip)**<br> Get a Zip or clone this repository <br>(10 Mo)| **[<img width=\"50px\" src=\"fidle/img/00-Datasets-tar.svg\"></img><br>Datasets](https://cloud.univ-grenoble-alpes.fr/index.php/s/wxCztjYBbQ6zwd6)**<br>All the needed datasets<br>(1.2 Go)|\n",
+ "\n",
+ "Have a look about **[How to get and install](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/Install-Fidle)** these notebooks and datasets.\n",
+ "\n",
+ "\n",
+ "## Jupyter notebooks\n",
+ "\n",
+ "<!-- INDEX_BEGIN -->\n",
+ "| | |\n",
+ "|--|--|\n",
+ "|LINR1| [Linear regression with direct resolution](LinearReg/01-Linear-Regression.ipynb)<br>Direct determination of linear regression |\n",
+ "|GRAD1| [Linear regression with gradient descent](LinearReg/02-Gradient-descent.ipynb)<br>An example of gradient descent in the simple case of a linear regression.|\n",
+ "|POLR1| [Complexity Syndrome](LinearReg/03-Polynomial-Regression.ipynb)<br>Illustration of the problem of complexity with the polynomial regression|\n",
+ "|LOGR1| [Logistic regression, in pure Tensorflow](LinearReg/04-Logistic-Regression.ipynb)<br>Logistic Regression with Mini-Batch Gradient Descent using pure TensorFlow. |\n",
+ "|PER57| [Perceptron Model 1957](IRIS/01-Simple-Perceptron.ipynb)<br>A simple perceptron, with the IRIS dataset.|\n",
+ "|BHP1| [Regression with a Dense Network (DNN)](BHPD/01-DNN-Regression.ipynb)<br>A Simple regression with a Dense Neural Network (DNN) - BHPD dataset|\n",
+ "|BHP2| [Regression with a Dense Network (DNN) - Advanced code](BHPD/02-DNN-Regression-Premium.ipynb)<br>More advanced example of DNN network code - BHPD dataset|\n",
+ "|MNIST1| [Simple classification with DNN](MNIST/01-DNN-MNIST.ipynb)<br>Example of classification with a fully connected neural network|\n",
+ "|GTS1| [CNN with GTSRB dataset - Data analysis and preparation](GTSRB/01-Preparation-of-data.ipynb)<br>Episode 1 : Data analysis and creation of a usable dataset|\n",
+ "|GTS2| [CNN with GTSRB dataset - First convolutions](GTSRB/02-First-convolutions.ipynb)<br>Episode 2 : First convolutions and first results|\n",
+ "|GTS3| [CNN with GTSRB dataset - Monitoring ](GTSRB/03-Tracking-and-visualizing.ipynb)<br>Episode 3 : Monitoring and analysing training, managing checkpoints|\n",
+ "|GTS4| [CNN with GTSRB dataset - Data augmentation ](GTSRB/04-Data-augmentation.ipynb)<br>Episode 4 : Improving the results with data augmentation|\n",
+ "|GTS5| [CNN with GTSRB dataset - Full convolutions ](GTSRB/05-Full-convolutions.ipynb)<br>Episode 5 : A lot of models, a lot of datasets and a lot of results.|\n",
+ "|GTS6| [CNN with GTSRB dataset - Full convolutions as a batch](GTSRB/06-Notebook-as-a-batch.ipynb)<br>Episode 6 : Run Full convolution notebook as a batch|\n",
+ "|GTS7| [CNN with GTSRB dataset - Show reports](GTSRB/07-Show-report.ipynb)<br>Episode 7 : Displaying the reports of the different jobs|\n",
+ "|TSB1| [Tensorboard with/from Jupyter ](GTSRB/99-Scripts-Tensorboard.ipynb)<br>4 ways to use Tensorboard from the Jupyter environment|\n",
+ "|IMDB1| [Text embedding with IMDB](IMDB/01-Embedding-Keras.ipynb)<br>A very classical example of word embedding for text classification (sentiment analysis)|\n",
+ "|IMDB2| [Text embedding with IMDB - Reloaded](IMDB/02-Prediction.ipynb)<br>Example of reusing a previously saved model|\n",
+ "|IMDB3| [Text embedding/LSTM model with IMDB](IMDB/03-LSTM-Keras.ipynb)<br>Still the same problem, but with a network combining embedding and LSTM|\n",
+ "|SYNOP1| [Time series with RNN - Preparation of data](SYNOP/01-Preparation-of-data.ipynb)<br>Episode 1 : Data analysis and creation of a usable dataset|\n",
+ "|SYNOP2| [Time series with RNN - Try a prediction](SYNOP/02-First-predictions.ipynb)<br>Episode 2 : Training session and first predictions|\n",
+ "|SYNOP3| [Time series with RNN - 12h predictions](SYNOP/03-12h-predictions.ipynb)<br>Episode 3: Attempt to predict in the longer term |\n",
+ "|VAE1| [Variational AutoEncoder (VAE) with MNIST](VAE/01-VAE-with-MNIST.nbconvert.ipynb)<br>Episode 1 : Model construction and Training|\n",
+ "|VAE2| [Variational AutoEncoder (VAE) with MNIST - Analysis](VAE/02-VAE-with-MNIST-post.ipynb)<br>Episode 2 : Exploring our latent space|\n",
+ "|VAE3| [About the CelebA dataset](VAE/03-About-CelebA.ipynb)<br>Episode 3Â : About the CelebA dataset, a more fun dataset ;-)|\n",
+ "|VAE4| [Preparation of the CelebA dataset](VAE/04-Prepare-CelebA-datasets.ipynb)<br>Episode 4Â : Preparation of a clustered dataset, batchable|\n",
+ "|VAE5| [Checking the clustered CelebA dataset](VAE/05-Check-CelebA.ipynb)<br>Episode 5Â :\tChecking the clustered dataset|\n",
+ "|VAE6| [Variational AutoEncoder (VAE) with CelebA (small)](VAE/06-VAE-with-CelebA-s.nbconvert.ipynb)<br>Episode 6Â : Variational AutoEncoder (VAE) with CelebA (small res.)|\n",
+ "|VAE7| [Variational AutoEncoder (VAE) with CelebA (medium)](VAE/07-VAE-with-CelebA-m.nbconvert.ipynb)<br>Episode 7Â : Variational AutoEncoder (VAE) with CelebA (medium res.)|\n",
+ "|VAE8| [Variational AutoEncoder (VAE) with CelebA - Analysis](VAE/08-VAE-withCelebA-post.ipynb)<br>Episode 8Â : Exploring latent space of our trained models|\n",
+ "|ACTF1| [Activation functions](Misc/Activation-Functions.ipynb)<br>Some activation functions, with their derivatives.|\n",
+ "|NP1| [A short introduction to Numpy](Misc/Numpy.ipynb)<br>Numpy is an essential tool for the Scientific Python.|\n",
+ "<!-- INDEX_END -->\n",
+ "\n",
+ "\n",
+ "## Installation\n",
+ "\n",
+ "A procedure for **configuring** and **starting Jupyter** is available in the **[Wiki](https://gricad-gitlab.univ-grenoble-alpes.fr/talks/fidle/-/wikis/Install-Fidle)**.\n",
+ "\n",
+ "## Licence\n",
+ "\n",
+ "[<img width=\"100px\" src=\"fidle/img/00-fidle-CC BY-NC-SA.svg\"></img>](https://creativecommons.org/licenses/by-nc-sa/4.0/) \n",
+ "\\[en\\] Attribution - NonCommercial - ShareAlike 4.0 International (CC BY-NC-SA 4.0) \n",
+ "\\[Fr\\] Attribution - Pas d’Utilisation Commerciale - Partage dans les Mêmes Conditions 4.0 International \n",
+ "See [License](https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode). \n",
+ "See [Disclaimer](https://creativecommons.org/licenses/by-nc-sa/4.0/#). \n",
+ "\n",
+ "\n",
+ "----\n",
+ "[<img width=\"80px\" src=\"fidle/img/00-Fidle-logo-01.svg\"></img>](#top)\n"
+ ]
+ }
+ ],
+ "metadata": {
+ "language_info": {
+ "codemirror_mode": {
+ "name": "ipython",
+ "version": 3
+ },
+ "file_extension": ".py",
+ "mimetype": "text/x-python",
+ "name": "python",
+ "nbconvert_exporter": "python",
+ "pygments_lexer": "ipython3",
+ "version": "3.7.7"
+ }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 4
+}
diff --git a/fidle/Update_index.ipynb b/fidle/Update_index.ipynb
index 71c7fa5..ec42e67 100644
--- a/fidle/Update_index.ipynb
+++ b/fidle/Update_index.ipynb
@@ -207,7 +207,7 @@
"\n",
"# ---- Save it\n",
"#\n",
- "with open('../test.ipynb', mode=\"w\", encoding='utf-8') as fp:\n",
+ "with open('../READMEv2.ipynb', mode=\"w\", encoding='utf-8') as fp:\n",
" nbformat.write(notebook, fp)"
]
},
diff --git a/fidle/img/00-Datasets-tar.svg b/fidle/img/00-Datasets-tar.svg
new file mode 100644
index 0000000..9cb96df
--- /dev/null
+++ b/fidle/img/00-Datasets-tar.svg
@@ -0,0 +1 @@
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diff --git a/fidle/img/00-Notebooks.svg b/fidle/img/00-Notebooks.svg
new file mode 100644
index 0000000..7befe03
--- /dev/null
+++ b/fidle/img/00-Notebooks.svg
@@ -0,0 +1 @@
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\ No newline at end of file
--
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