- 01 Jul, 2021 1 commit
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François Lavoué authoredOn branch master
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- 24 Jul, 2020 1 commit
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François Lavoué authored
--- On branch master modified: .gitignore modified: 04_make_SEM46_input_files.sh modified: 05_make_acqui_file.sh modified: 06_make_source_file.sh modified: 07_check_domain_decomposition.sh modified: 11_run_meshcreationP4_orthorombic.sh modified: 12_run_projectionP4_orthorombic.sh modified: 13_run_sem46P4_orthorombic.sh modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: 22_plot_VTS_model_with_paraview.py modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: README.md modified: build_simple_synthetic_model_2D.in modified: build_simple_synthetic_model_3D.in modified: extend_2D_model_to_3D.in deleted: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v0-no-water.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200-ms-in-water.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v8a_2-horizontal-layers.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v8b_2-horizontal-layers_and_dipping_fault.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v9_2-horizontal-layers_and_rectangular-anomaly.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_3D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_3D_v9_2-horizontal-layers_and_rectangular-anomaly.pdf new file: input_files/SEM46_input_files/acquis/acqui_1-src_450-recs_drec-10m new file: input_files/SEM46_input_files/acquis/acqui_1-src_450-recs_drec-10m_id deleted: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-250-20m_1x93-recs_drec-5m deleted: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-250-20m_1x93-recs_drec-5m_id deleted: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x20m_93x7-recs_drec-5x25m deleted: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x20m_93x7-recs_drec-5x25m_id deleted: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x250m_93x7-recs_drec-5x25m deleted: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x250m_93x7-recs_drec-5x25m_id deleted: input_files/SEM46_input_files/input_run_dam_simulation_* new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/acqui new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/acqui_id new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/build_simple_synthetic_model_2D.in new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/build_simple_synthetic_model_3D.in new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/extend_2D_model_to_3D.in new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/extra_mesh_info.in new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/fsource new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/qp_cart new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/qs_cart new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/rho_cart new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/topo new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/vp_cart new file: input_files/SEM46_input_files/input_run_simulation_in_simple_synthetic_model_v8a_2-horizontal-layers/vs_cart deleted: input_files/SEM46_input_files/models/simple_synthetic_model_2D_appli-FL-dams_* new file: input_files/SEM46_input_files/models/simple_synthetic_model_3D_v8a_2-horizontal-layers/.readme.txt deleted: input_files/SEM46_input_files/sources/fricker_10Hz_nt10001_dt0.1ms.bin deleted: input_files/SEM46_input_files/sources/fricker_10Hz_nt15001_dt0.0666ms.bin deleted: input_files/SEM46_input_files/sources/fricker_10Hz_nt30001_dt0.0333ms.bin new file: input_files/SEM46_input_files/sources/fricker_5Hz_nt4001_dt0.001s.bin modified: input_files/SEM46_input_files/templates/11_run_meshcreationP4_orthorombic.sh modified: input_files/SEM46_input_files/templates/12_run_projectionP4_orthorombic.sh modified: input_files/SEM46_input_files/templates/mesh_input_namelist modified: input_files/SEM46_input_files/templates/projection_input_namelist deleted: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v0-no-water.in deleted: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200ms-in-water.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v5_3-horizontal-layers_and_dipping_interface.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v8a_2-horizontal-layers.in renamed: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.in -> input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v8b_2-horizontal-layers_and_dipping_fault.in renamed: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in -> input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v9_2-horizontal-layers_and_rectangular-anomaly.in renamed: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_3D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in -> input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_3D_v9_2-horizontal-layers_and_rectangular-anomaly.in deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/ deleted: results/output_run_dam_simulation_*
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- 17 Apr, 2020 1 commit
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Francois Lavoue authored
--- On branch master new file: LICENSE
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- 06 Feb, 2020 2 commits
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Francois Lavoue authored
Changes since last master version include: - more templates and resulting figures. - an option for hard-coded tuning in build_simple_models_*.py. - checking domain decomposition in 07_*.sh. - plotting models and wavefields in 30_*.ipynb. - how to run a function in parallel in a notebook (30_*.ipynb). - how to convert a notebook (30_*.ipynb) into a script. --- On branch master modified: .gitignore modified: 04_make_SEM46_input_files.sh modified: 05_make_acqui_file.sh modified: 06_make_source_file.sh new file: 07_check_domain_decomposition.sh modified: 10_link_SEM46_inputs.sh typechange: 11_run_meshcreationP4_orthorombic.sh typechange: 12_run_projectionP4_orthorombic.sh typechange: 13_run_sem46P4_orthorombic.sh modified: 14_pack_output_SEM46.sh modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: 22_plot_VTS_model_with_paraview.py modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: README.md modified: build_simple_synthetic_model_2D.in modified: build_simple_synthetic_model_3D.in modified: extend_2D_model_to_3D.in renamed: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_2D.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf renamed: figs/simple_synthetic_models/Russian-model2_2-horizontal-layers_and_dipping_fault.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.pdf new file: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v0-no-water.pdf new file: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200-ms-in-water.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v0a_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v0a_complete-template.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v0b_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v0b_complete-template.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v0c_complete-template_with-gradients.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v0c_complete-template_with-gradients.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v1_3-horizontal-layers.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v1_3-horizontal-layers.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v3_3-horizontal-layers_and_positive-topo.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v3_3-horizontal-layers_and_positive-topo.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v4a_3-horizontal-layers_and_anticlinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v4a_3-horizontal-layers_and_anticlinal.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v4b_3-horizontal-layers_and_synclinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v4b_3-horizontal-layers_and_synclinal.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v5_3-horizontal-layers_and_dipping_interface.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v5_3-horizontal-layers_and_dipping_interface.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v6_3-horizontal-layers_with_gradients_and_dipping_interfaces.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v6_3-horizontal-layers_with_gradients_and_dipping_interfaces.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf renamed: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_3D.pdf -> figs/simple_synthetic_models/simple_synthetic_model_3D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-250-20m_1x93-recs_drec-5m new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-250-20m_1x93-recs_drec-5m_id new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x20m_93x7-recs_drec-5x25m new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x20m_93x7-recs_drec-5x25m_id new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x250m_93x7-recs_drec-5x25m new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x250m_93x7-recs_drec-5x25m_id new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/11_run_meshcreationP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/12_run_projectionP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/13_run_sem46P4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/acqui new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/acqui_id new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/build_simple_synthetic_model_2D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/build_simple_synthetic_model_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/exotic_QC_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/extend_2D_model_to_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/extra_mesh_info.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/fsource new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/mesh_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/projection_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/qp_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/qs_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/rho_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/sem_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/topo new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/vp_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/vs_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/11_run_meshcreationP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/12_run_projectionP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/13_run_sem46P4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/acqui new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/acqui_id new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/build_simple_synthetic_model_2D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/build_simple_synthetic_model_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/exotic_QC_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/extend_2D_model_to_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/extra_mesh_info.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/fsource new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/mesh_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/projection_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/sem_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/topo new file: input_files/SEM46_input_files/models/simple_synthetic_model_2D_appli-FL-dams_v0-no-water/.readme.txt new file: input_files/SEM46_input_files/models/simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200ms-in-water/.readme.txt new file: input_files/SEM46_input_files/models/simple_synthetic_model_3D_appli-FL-dams_v0-no-water/.readme.txt new file: input_files/SEM46_input_files/models/simple_synthetic_model_3D_appli-FL-dams_v1.2-Vs-200ms-in-water/.readme.txt new file: input_files/SEM46_input_files/sources/fricker_10Hz_nt10001_dt0.1ms.bin new file: input_files/SEM46_input_files/sources/fricker_10Hz_nt15001_dt0.0666ms.bin new file: input_files/SEM46_input_files/sources/fricker_10Hz_nt30001_dt0.0333ms.bin new file: input_files/SEM46_input_files/templates/11_run_meshcreationP4_orthorombic.sh new file: input_files/SEM46_input_files/templates/12_run_projectionP4_orthorombic.sh new file: input_files/SEM46_input_files/templates/13_run_sem46P4_orthorombic.sh modified: input_files/SEM46_input_files/templates/projection_input_namelist modified: input_files/SEM46_input_files/templates/sem_input_namelist new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v0-no-water.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200ms-in-water.in new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/Uy_field_45_0.3-s.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/acqui.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/mesh1.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/mesh2.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/plot_traces-vs-offset_y-comp_norm-trace-by-trace.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/plot_wiggles.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/source.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/spectra.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/vp_2D.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/vp_3D.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/job_info/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/model_cart/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/model_gll/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/seismograms/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/snapshots/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/vtk_files/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/Uy_field_90_0.3-s.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/acqui.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/mesh1.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/mesh2.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/plot_traces-vs-offset_y-comp_norm-trace-by-trace.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/plot_wiggles.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/source.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/spectra.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/vp_2D.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/vp_3D.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/job_info/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/model_cart/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/model_gll/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/seismograms/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/snapshots/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/vtk_files/.readme.txt modified: scripts/build_simple_synthetic_model_2D.py modified: scripts/extend_2D_model_to_3D.py
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Francois Lavoue authored
This should now be merged into the master branch and become the new reference version of the package. --- On branch appli_FL_dams modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: 22_plot_VTS_model_with_paraview.py modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: build_simple_synthetic_model_2D.in renamed: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_2D.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf renamed: figs/simple_synthetic_models/Russian-model2_2-horizontal-layers_and_dipping_fault.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200-ms-in-water.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v0a_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v0a_complete-template.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v0b_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v0b_complete-template.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v0c_complete-template_with-gradients.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v0c_complete-template_with-gradients.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v1_3-horizontal-layers.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v1_3-horizontal-layers.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v3_3-horizontal-layers_and_positive-topo.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v3_3-horizontal-layers_and_positive-topo.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v4a_3-horizontal-layers_and_anticlinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v4a_3-horizontal-layers_and_anticlinal.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v4b_3-horizontal-layers_and_synclinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v4b_3-horizontal-layers_and_synclinal.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v5_3-horizontal-layers_and_dipping_interface.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v5_3-horizontal-layers_and_dipping_interface.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v6_3-horizontal-layers_with_gradients_and_dipping_interfaces.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v6_3-horizontal-layers_with_gradients_and_dipping_interfaces.pdf renamed: figs/simple_synthetic_models/simple_synthetic_model_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf -> figs/simple_synthetic_models/simple_synthetic_model_2D_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf renamed: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_3D.pdf -> figs/simple_synthetic_models/simple_synthetic_model_3D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/11_run_meshcreationP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/12_run_projectionP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/13_run_sem46P4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/acqui new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/acqui_id renamed: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v1.in -> input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/build_simple_synthetic_model_2D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/build_simple_synthetic_model_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/exotic_QC_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/extend_2D_model_to_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/extra_mesh_info.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/fsource new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/mesh_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/projection_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/sem_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1.2-Vs-200ms-in-water/topo new file: input_files/SEM46_input_files/models/simple_synthetic_model_2D_appli-FL-dams_v0-no-water/.readme.txt new file: input_files/SEM46_input_files/models/simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200ms-in-water/.readme.txt new file: input_files/SEM46_input_files/models/simple_synthetic_model_3D_appli-FL-dams_v0-no-water/.readme.txt new file: input_files/SEM46_input_files/models/simple_synthetic_model_3D_appli-FL-dams_v1.2-Vs-200ms-in-water/.readme.txt new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v1.2-Vs-200ms-in-water.in new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/Uy_field_45_0.3-s.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/acqui.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/mesh1.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/mesh2.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/plot_traces-vs-offset_y-comp_norm-trace-by-trace.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/plot_wiggles.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/source.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/spectra.pdf new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/vp_2D.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/figs/vp_3D.png new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/job_info/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/model_cart/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/model_gll/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/seismograms/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/snapshots/.readme.txt new file: results/output_run_dam_simulation_v0-no-water_xy-src-300x250m/vtk_files/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/Uy_field_90_0.3-s.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/acqui.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/mesh1.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/mesh2.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/plot_traces-vs-offset_y-comp_norm-trace-by-trace.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/plot_wiggles.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/source.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/spectra.pdf new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/vp_2D.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/figs/vp_3D.png new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/job_info/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/model_cart/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/model_gll/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/seismograms/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/snapshots/.readme.txt new file: results/output_run_dam_simulation_v1.2-Vs-200ms-in-water_xy-src-300x250m/vtk_files/.readme.txt
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- 17 Jan, 2020 4 commits
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Francois Lavoue authored
--- On branch appli_FL_dams modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb
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Francois Lavoue authored
Helpful for editing sem_input_namelist. --- On branch appli_FL_dams new file: 07_check_domain_decomposition.sh
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Francois Lavoue authored
- Filter traces (in parallel). - Plot wavefields. This should be merged to the `master` branch. --- On branch appli_FL_dams modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: README.md
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Francois Lavoue authored
In particular, put the source in the middle of the dam, i.e. on the zx vertical cross-section extracted by SEM46 for wavefield snapshots. --- On branch appli_FL_dams modified: 05_make_acqui_file.sh modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: 22_plot_VTS_model_with_paraview.py new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-250-20m_1x93-recs_drec-5m new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-250-20m_1x93-recs_drec-5m_id renamed: input_files/SEM46_input_files/acquis/acqui_1-src_93x7-recs_drec-5x25m -> input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x20m_93x7-recs_drec-5x25m renamed: input_files/SEM46_input_files/acquis/acqui_1-src_93x7-recs_drec-5x25m_id -> input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x20m_93x7-recs_drec-5x25m_id new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x250m_93x7-recs_drec-5x25m new file: input_files/SEM46_input_files/acquis/acqui_1-src_xy-src-300x250m_93x7-recs_drec-5x25m_id modified: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/acqui modified: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/acqui_id new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/qp_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/qs_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/rho_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/vp_cart new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/vs_cart
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- 10 Jan, 2020 3 commits
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Francois Lavoue authored
This also enables to plot wavefields instead of models. --- On branch appli_FL_dams modified: 22_plot_VTS_model_with_paraview.py
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Francois Lavoue authored
(v0-no-water) --- On branch appli_FL_dams modified: .gitignore modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: 22_plot_VTS_model_with_paraview.py
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Francois Lavoue authored
--- On branch appli_FL_dams modified: 04_make_SEM46_input_files.sh modified: 05_make_acqui_file.sh modified: 06_make_source_file.sh modified: 11_run_meshcreationP4_orthorombic.sh modified: 12_run_projectionP4_orthorombic.sh modified: 13_run_sem46P4_orthorombic.sh modified: build_simple_synthetic_model_2D.in modified: extend_2D_model_to_3D.in new file: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v0-no-water.pdf renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/11_run_meshcreationP4_orthorombic.sh -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/11_run_meshcreationP4_orthorombic.sh renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/12_run_projectionP4_orthorombic.sh -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/12_run_projectionP4_orthorombic.sh renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/13_run_sem46P4_orthorombic.sh -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/13_run_sem46P4_orthorombic.sh renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/acqui -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/acqui renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/acqui_id -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/acqui_id renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/build_simple_synthetic_model_2D.in -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/build_simple_synthetic_model_2D.in renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/build_simple_synthetic_model_3D.in -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/build_simple_synthetic_model_3D.in renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/exotic_QC_input_namelist -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/exotic_QC_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/extend_2D_model_to_3D.in renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/extra_mesh_info.in -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/extra_mesh_info.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/fsource renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/mesh_input_namelist -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/mesh_input_namelist renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/projection_input_namelist -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/projection_input_namelist renamed: input_files/SEM46_input_files/input_run_dam_simulation_v1/sem_input_namelist -> input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/sem_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v0-no-water/topo deleted: input_files/SEM46_input_files/input_run_dam_simulation_v1/extend_2D_model_to_3D.in deleted: input_files/SEM46_input_files/input_run_dam_simulation_v1/fsource deleted: input_files/SEM46_input_files/input_run_dam_simulation_v1/topo new file: input_files/SEM46_input_files/sources/fricker_10Hz_nt15001_dt0.0666ms.bin new file: input_files/SEM46_input_files/sources/fricker_10Hz_nt30001_dt0.0333ms.bin modified: input_files/SEM46_input_files/templates/12_run_projectionP4_orthorombic.sh modified: input_files/SEM46_input_files/templates/projection_input_namelist modified: input_files/SEM46_input_files/templates/sem_input_namelist new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v0-no-water.in modified: scripts/build_simple_synthetic_model_2D.py modified: scripts/extend_2D_model_to_3D.py
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- 08 Jan, 2020 6 commits
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Francois Lavoue authored
(except heavy model files that can be generated using the scripts) --- On branch appli_FL_dams new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/11_run_meshcreationP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/12_run_projectionP4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/13_run_sem46P4_orthorombic.sh new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/acqui new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/acqui_id new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/build_simple_synthetic_model_2D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/build_simple_synthetic_model_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/exotic_QC_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/extend_2D_model_to_3D.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/extra_mesh_info.in new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/fsource new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/mesh_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/projection_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/sem_input_namelist new file: input_files/SEM46_input_files/input_run_dam_simulation_v1/topo
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Francois Lavoue authored
--- On branch appli_FL_dams typechange: 11_run_meshcreationP4_orthorombic.sh typechange: 12_run_projectionP4_orthorombic.sh typechange: 13_run_sem46P4_orthorombic.sh modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: extend_2D_model_to_3D.in modified: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.pdf modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v1.in modified: scripts/build_simple_synthetic_model_2D.py
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Francois Lavoue authored
Now link to submission scripts from input run dir, because they are specific to each case. --- On branch appli_FL_dams modified: 10_link_SEM46_inputs.sh
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Francois Lavoue authored
--- On branch appli_FL_dams modified: 06_make_source_file.sh new file: input_files/SEM46_input_files/sources/fricker_10Hz_nt10001_dt0.1ms.bin
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Francois Lavoue authored
Adapt acqui to dam simulations + add option to reverse x and y in order to align acquisition lines in desired direction. --- On branch appli_FL_dams modified: 05_make_acqui_file.sh new file: input_files/SEM46_input_files/acquis/acqui_1-src_93x7-recs_drec-5x25m new file: input_files/SEM46_input_files/acquis/acqui_1-src_93x7-recs_drec-5x25m_id
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Francois Lavoue authored
Adapt SEM input files to dam simulations + correctly read gradient lines in build_simple_synthetic_model_2D.in. + copy submission scripts from template dir. This bug correction should be merged or cherry-picked in the master branch. --- On branch appli_FL_dams modified: 04_make_SEM46_input_files.sh new file: input_files/SEM46_input_files/templates/11_run_meshcreationP4_orthorombic.sh new file: input_files/SEM46_input_files/templates/12_run_projectionP4_orthorombic.sh new file: input_files/SEM46_input_files/templates/13_run_sem46P4_orthorombic.sh
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- 07 Jan, 2020 4 commits
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Francois Lavoue authored
- Topography is now defined as the first vertical point where model (Vp) values are not NaNs (/!\ cell point, not edge), for each x-point. + Plot topography for check. --- On branch appli_FL_dams modified: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.pdf modified: scripts/build_simple_synthetic_model_2D.py
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Francois Lavoue authored
Generate an input file and modify the script build_simple_synthetic_model_2D.py: - add an option to make triangular bumps instead of Gaussian ones. - add an option for some case-specific hard-coded tuning (in this case, to avoid putting water on one side of the dam). Still to do: - correct the definition of the topography, by considering the first non-NaN value instead of the first interface (which may not be the shallowest one in case of dipping interfaces and/or bumps). - plot topography. On branch appli_FL_dams modified: build_simple_synthetic_model_2D.in new file: figs/simple_synthetic_models/simple_synthetic_model_2D_appli-FL-dams_v1.pdf new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-dams_v1.in deleted: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-trains_1-layer-with-gradient_v1.in deleted: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-trains_1-layer-with-gradient_v2.in modified: scripts/build_simple_synthetic_model_2D.py
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Francois Lavoue authored
Forked from branch `appli_FL_trains`, commit 832aee78. --- On branch appli_FL_dams deleted: 40_train_simulations.ipynb modified: README.md
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Francois Lavoue authored
--- On branch appli_FL_trains modified: 20_make_src_rec_vtk.sh modified: 21_plot_VTK_mesh_with_paraview.py modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: 40_train_simulations.ipynb modified: README.md modified: build_simple_synthetic_model_2D.in deleted: build_simple_synthetic_model_3D.in modified: extend_2D_model_to_3D.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-trains_1-layer-with-gradient_v1.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_appli-FL-trains_1-layer-with-gradient_v2.in deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/acqui.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/compare_seismic_mode1.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/group_dispersion_curves_vg-fta.png deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/line1001_z_norm-global_x1000.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/mesh.png deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/plot_wiggle.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/source.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/spectra.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/structure.png deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/vp.png
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- 02 Oct, 2019 2 commits
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Francois Lavoue authored
--- On branch master modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/acqui.pdf modified: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/compare_seismic_mode1.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/line1001_z_norm-global_x1000.pdf new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/plot_traces-vs-offset_line1001_z-comp_norm-global_x1000.pdf deleted: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/plot_wiggle.pdf new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/plot_wiggles.pdf modified: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/source.pdf modified: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/spectra.pdf
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Francois Lavoue authored
Main master changes since fork: dcef7ec7 Compute and plot group velocity dispersion curves. cb06d024 Replace NaNs above topography by vertically-invariant extrapolation of surface values. 11128e81 Add gradients in simple synthetic models. --- On branch appli_FL_trains modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: README.md modified: build_simple_synthetic_model_2D.in modified: build_simple_synthetic_model_3D.in modified: extend_2D_model_to_3D.in renamed: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf -> figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_2D.pdf new file: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_3D.pdf new file: figs/simple_synthetic_models/simple_synthetic_model_v0c_complete-template_with-gradients.pdf new file: figs/simple_synthetic_models/simple_synthetic_model_v6_3-horizontal-layers_with_gradients_and_dipping_interfaces.pdf modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0a_complete-template.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0b_complete-template.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0c_complete-template-with-gradients.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v1_3-horizontal-layers.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v3_3-horizontal-layers_and_positive-topo.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v4a_3-horizontal-layers_and_anticlinal.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v4b_3-horizontal-layers_and_synclinal.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v5_3-horizontal-layers_and_dipping_interface.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v6_3-horizontal-layers_with_gradients_and_dipping_interface.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v7_3-horizontal-layers_and_deep-vertical-intrusion.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_3D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/group_dispersion_curves_vg-fta.png new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/spectra.pdf modified: scripts/build_simple_synthetic_model_2D.py modified: scripts/build_simple_synthetic_model_3D.py modified: scripts/extend_2D_model_to_3D.py
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- 24 Sep, 2019 3 commits
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Francois Lavoue authored
--- On branch master modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: scripts/build_simple_synthetic_model_2D.py modified: scripts/build_simple_synthetic_model_3D.py
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Francois Lavoue authored
Using either Laurent Stehly's pycorr_disp module or the vg_fta executable from the MSNoise package. --- On branch master modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: README.md new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/group_dispersion_curves_vg-fta.png new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/spectra.pdf
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Francois Lavoue authored
(as needed by SEM46, which will then truncate the model according to topography) --- On branch master modified: README.md modified: build_simple_synthetic_model_3D.in modified: extend_2D_model_to_3D.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0c_complete-template-with-gradients.in modified: scripts/build_simple_synthetic_model_3D.py modified: scripts/extend_2D_model_to_3D.py
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- 23 Sep, 2019 1 commit
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Francois Lavoue authored
+ figures of slices for 3D models. + update readme --- On branch master modified: README.md modified: build_simple_synthetic_model_2D.in renamed: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf -> figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_2D.pdf new file: figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly_3D.pdf new file: figs/simple_synthetic_models/simple_synthetic_model_v0c_complete-template_with-gradients.pdf new file: figs/simple_synthetic_models/simple_synthetic_model_v6_3-horizontal-layers_with_gradients_and_dipping_interfaces.pdf modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0a_complete-template.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0b_complete-template.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0c_complete-template-with-gradients.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v1_3-horizontal-layers.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v3_3-horizontal-layers_and_positive-topo.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v4a_3-horizontal-layers_and_anticlinal.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v4b_3-horizontal-layers_and_synclinal.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v5_3-horizontal-layers_and_dipping_interface.in new file: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v6_3-horizontal-layers_with_gradients_and_dipping_interface.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v7_3-horizontal-layers_and_deep-vertical-intrusion.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_3D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in modified: scripts/build_simple_synthetic_model_2D.py modified: scripts/build_simple_synthetic_model_3D.py
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- 16 Sep, 2019 1 commit
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Francois Lavoue authored
--- On branch master renamed: figs/Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf -> figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf renamed: figs/Russian-model2_2-horizontal-layers_and_dipping_fault.pdf -> figs/simple_synthetic_models/Russian-model2_2-horizontal-layers_and_dipping_fault.pdf renamed: figs/simple_synthetic_model_v0a_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v0a_complete-template.pdf renamed: figs/simple_synthetic_model_v0b_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v0b_complete-template.pdf renamed: figs/simple_synthetic_model_v1_3-horizontal-layers.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v1_3-horizontal-layers.pdf renamed: figs/simple_synthetic_model_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf renamed: figs/simple_synthetic_model_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf renamed: figs/simple_synthetic_model_v3_3-horizontal-layers_and_positive-topo.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v3_3-horizontal-layers_and_positive-topo.pdf renamed: figs/simple_synthetic_model_v4a_3-horizontal-layers_and_anticlinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v4a_3-horizontal-layers_and_anticlinal.pdf renamed: figs/simple_synthetic_model_v4b_3-horizontal-layers_and_synclinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v4b_3-horizontal-layers_and_synclinal.pdf renamed: figs/simple_synthetic_model_v5_3-horizontal-layers_and_dipping_interface.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v5_3-horizontal-layers_and_dipping_interface.pdf renamed: figs/simple_synthetic_model_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf
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- 01 Aug, 2019 2 commits
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Francois Lavoue authored
Goal: better understand the seismic signals generated by trains. In collaboration with Olivier Coutant, Pierre Boue and Florent Brenguier. --- On branch appli_FL_trains new file: 40_train_simulations.ipynb modified: README.md
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Francois Lavoue authored
--- On branch master modified: 14_pack_output_SEM46.sh renamed: figs/Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf -> figs/simple_synthetic_models/Russian-model1_2-horizontal-layers_and_rectangular-anomaly.pdf renamed: figs/Russian-model2_2-horizontal-layers_and_dipping_fault.pdf -> figs/simple_synthetic_models/Russian-model2_2-horizontal-layers_and_dipping_fault.pdf renamed: figs/simple_synthetic_model_v0a_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v0a_complete-template.pdf renamed: figs/simple_synthetic_model_v0b_complete-template.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v0b_complete-template.pdf renamed: figs/simple_synthetic_model_v1_3-horizontal-layers.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v1_3-horizontal-layers.pdf renamed: figs/simple_synthetic_model_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.pdf renamed: figs/simple_synthetic_model_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.pdf renamed: figs/simple_synthetic_model_v3_3-horizontal-layers_and_positive-topo.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v3_3-horizontal-layers_and_positive-topo.pdf renamed: figs/simple_synthetic_model_v4a_3-horizontal-layers_and_anticlinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v4a_3-horizontal-layers_and_anticlinal.pdf renamed: figs/simple_synthetic_model_v4b_3-horizontal-layers_and_synclinal.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v4b_3-horizontal-layers_and_synclinal.pdf renamed: figs/simple_synthetic_model_v5_3-horizontal-layers_and_dipping_interface.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v5_3-horizontal-layers_and_dipping_interface.pdf renamed: figs/simple_synthetic_model_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf -> figs/simple_synthetic_models/simple_synthetic_model_v7_3-horizontal-layers_and_deep-vertical-intrusion.pdf
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- 25 Jul, 2019 2 commits
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Franc,ois Lavoue authored
--- On branch master modified: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/line1001_z_norm-global_x1000.pdf
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François Lavoué authored
- add template exotic_QC_input_namelist. - add makedirs when needed. - update readme with required Python environment. --- On branch master modified: .gitignore modified: 04_make_SEM46_input_files.sh modified: 05_make_acqui_file.sh modified: 06_make_source_file.sh modified: README.md new file: input_files/SEM46_input_files/templates/exotic_QC_input_namelist modified: scripts/build_simple_synthetic_model_2D.py modified: scripts/build_simple_synthetic_model_3D.py modified: scripts/extend_2D_model_to_3D.py
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- 24 Jul, 2019 1 commit
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François Lavoué authored
--- On branch master new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/acqui.pdf new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/compare_seismic_mode1.pdf new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/mesh.png new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/plot_wiggle.pdf new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/source.pdf new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/structure.png new file: results/output_run_Russian-model2_2-horizontal-layers_and_dipping_fault/figs/vp.png
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- 22 Jul, 2019 4 commits
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François Lavoué authored
--- On branch master new file: .gitignore
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François Lavoué authored
(seiscope_pytools.reads.read_simulation_parameters does not like that) --- On branch master modified: input_files/SEM46_input_files/templates/mesh_input_namelist
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François Lavoué authored
- This notebook is mostly for development and QC: it reads and plots all simulations parameters and outputs for a first check and visualization. - Meanwhile, it also provides examples of how to process and plot SEM46 results, using in particular the Seiscope PyTools (branch dev_FL, which you should have in your $PYTHONPATH). - I like doing this in a notebook in order to check and tune things interactively, but each cell of the notebook could also be exported to a script, or even as functions in a module if needed. --- On branch master new file: 30_process_and_plot_SEM46_simulation_results_for_QC.ipynb modified: README.md
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François Lavoué authored
Specify camera placement in user parameters, such as to make the rest of the script more generic. To do: - add slicing in 22_plot_VTS_model_with_paraview.py to visualize model interior. - add 23_plot_snapshot_movie_with_paraview.py. --- On branch master modified: 21_plot_VTK_mesh_with_paraview.py modified: 22_plot_VTS_model_with_paraview.py
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- 21 Jul, 2019 2 commits
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François Lavoué authored
NB: this build_simple_synthetic_model_3D.in will not be entirely functional for use by build_simple_synthetic_model_3D.py, but it contains the 3D domain size and min/max properties, which is enough to generate SEM46 input files. --- On branch master modified: scripts/extend_2D_model_to_3D.py
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François Lavoué authored
(remove unused parameters) --- On branch master modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model1_2-horizontal-layers_and_rectangular-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_Russian-model2_2-horizontal-layers_and_dipping_fault.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0a_complete-template.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v0b_complete-template.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v1_3-horizontal-layers.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v2a_3-horizontal-layers_and_shallow-rectangular-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v2b_3-horizontal-layers_and_shallow-gaussian-anomaly.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v3_3-horizontal-layers_and_positive-topo.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v4a_3-horizontal-layers_and_anticlinal.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v4b_3-horizontal-layers_and_synclinal.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v5_3-horizontal-layers_and_dipping_interface.in modified: input_files/build_simple_synthetic_models.ins/build_simple_synthetic_model_2D_v7_3-horizontal-layers_and_deep-vertical-intrusion.in
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