diff --git a/2-produce-graph/hist-evol-datasets-per-repo.png b/2-produce-graph/hist-evol-datasets-per-repo.png index b7470babcc97662606bff701b08b0bc55f5a4a47..4b2705236fb10acd93626b21df08bd7afd5b0164 100644 Binary files a/2-produce-graph/hist-evol-datasets-per-repo.png and b/2-produce-graph/hist-evol-datasets-per-repo.png differ diff --git a/2-produce-graph/hist-quantity-year-type.png b/2-produce-graph/hist-quantity-year-type.png index 57e87b073576561f4ce456963da0e9c83440b302..48619e98b5e1d9969ea31a323ddb5c72e04510a5 100644 Binary files a/2-produce-graph/hist-quantity-year-type.png and b/2-produce-graph/hist-quantity-year-type.png differ diff --git a/2-produce-graph/pie--datacite-client.png b/2-produce-graph/pie--datacite-client.png index 443468ca75023388bd815ecbf2893f6219c53b4f..19b061159ddf9d774b626d8453ce3721f449ae2b 100644 Binary files a/2-produce-graph/pie--datacite-client.png and b/2-produce-graph/pie--datacite-client.png differ diff --git a/2-produce-graph/pie--datacite-type.png b/2-produce-graph/pie--datacite-type.png index af9308cceca1ce828c1c79d9e85df6187615ceb8..f6e49612e47e18bbb90669f3ef9db5f81d7c17a2 100644 Binary files a/2-produce-graph/pie--datacite-type.png and b/2-produce-graph/pie--datacite-type.png differ diff --git a/dois-uga.csv b/dois-uga.csv index 6e23c5b3a61cdd55bfc7af549ea9087a2c323a24..a2faf1e48a9a3d8a66556104f2c47459cb034575 100644 --- a/dois-uga.csv +++ b/dois-uga.csv @@ -4816,3 +4816,88 @@ The complete dataset with the grey-scale volumes for all the specimens of the ex 'Deep-learning model for voltammogram analysis.zip' contains the deep-learning model file used in the code.",api,True,findable,0.0,0.0,0.0,0.0,1.0,2024-02-02T16:24:16.000Z,2024-02-02T16:24:16.000Z,cern.zenodo,cern,"Autonomous electrochemical research,closed-loop workflow,high-throughput experimentation,molecular electrochemistry,cyclic voltammetry,machine learning,Bayesian optimization","[{'subject': 'Autonomous electrochemical research'}, {'subject': 'closed-loop workflow'}, {'subject': 'high-throughput experimentation'}, {'subject': 'molecular electrochemistry'}, {'subject': 'cyclic voltammetry'}, {'subject': 'machine learning'}, {'subject': 'Bayesian optimization'}]",, 10.5281/zenodo.10607086,Fighting Climate Change: Mapping the Carbon Footprint Flows of COP 28,Zenodo,2024.0,en,Dataset,Creative Commons Attribution 4.0 International,"With each additional COP conference, there is a growing chorus of criticism due to the high carbon footprint associated with the event, mostly due to the intensive amount of international air travel. There has also been a growing chorus of voices raising the related question as to whether COP conferences can become virtual to play a greater leadership role in the reduction of carbon emissions and serve as a good role model for what it is advocating to the rest of the world. COVID19 demonstrated that it was possible for billions of people to adapt and rapidly change behavior from physical face-to-face meetings to virtual online ones. Even after COVID was over, many meetings that have migrated permanently to online. In this study, we consider the feasibility of migrating COP from a currently high to a low carbon emission event, mainly by minimizing the amount of air travel and cutting indirect carbon emissions. The study is framed as an optimization problem, a tradeoff between the carbon emissions of tens of thousands of long distance flights to one global COP destination and the carbon emissions of many shorter trips to an increased number of regional destinations. ",api,True,findable,0.0,0.0,0.0,0.0,0.0,2024-02-01T17:41:33.000Z,2024-02-01T17:41:33.000Z,cern.zenodo,cern,,,, +10.6084/m9.figshare.13646872,Additional file 1 of Performance of the ROX index to predict intubation in immunocompromised patients receiving high-flow nasal cannula for acute respiratory failure,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 1: Figure S1. ROC curve for ROX index 6 hours after HFNC onset. Figure S2. Probability of intubation according to the multivariable model including ROX index. Figure S3. ROC curve of adjusted ROX index 6 hours after HFNC onset. Figure S4. Comparison between ROC curves of adjusted ROX index and modified model without ROX index. Figure S5. Probability of intubation according to ROX index quartile.,mds,True,findable,0.0,0.0,17.0,1.0,0.0,2021-01-27T04:12:36.000Z,2021-01-27T04:12:40.000Z,figshare.ars,otjm,"Medicine,Sociology,FOS: Sociology,Immunology,FOS: Clinical medicine,Biological Sciences not elsewhere classified,Science Policy,Hematology,Virology","[{'subject': 'Medicine'}, {'subject': 'Sociology'}, {'subject': 'FOS: Sociology', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biological Sciences not elsewhere classified'}, {'subject': 'Science Policy'}, {'subject': 'Hematology'}, {'subject': 'Virology'}]",['6144606 Bytes'], +10.6084/m9.figshare.16851105,Additional file 20 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 20: Table S3. Characteristics of the 526 human breast tumor cohort.,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:05:31.000Z,2021-10-22T04:05:32.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['51712 Bytes'], +10.6084/m9.figshare.16851141,Additional file 4 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Audiovisual,Creative Commons Attribution 4.0 International,Additional file 4: Movie 3. Videomicroscopy of membrane-binding deficient NDPK-D mutant HeLa clones.,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:07:25.000Z,2021-10-22T04:07:27.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['7463148 Bytes'], +10.6084/m9.figshare.14176175,Additional file 1 of Ability of procalcitonin to distinguish between bacterial and nonbacterial infection in severe acute exacerbation of chronic obstructive pulmonary syndrome in the ICU,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,"Additional file 1: Online Resource 1. Detailed information regarding inclusion, no inclusion and exclusion criteria and definitions. Online Resource 2. PCT levels at inclusion (PCT-H0), at six hours (PCT-H6) and day 1 (PCT-H24) after inclusion, in subgroups of patients with (ATB+) (Panel a-c) and without (ATB-) (Panel d-f) antibiotics at inclusion. Online Resource 3. PCT levels at inclusion (PCT-H0), at six hours (PCT-H6) and day 1 (PCT-H24) after inclusion, in subgroups of patients with (PNP+) (Panel a-c) or without (PNP-) (Panel d-f) pneumonia at inclusion. Online Resource 4. Receiver operating characteristic (ROC) curves at any time (i.e., H0, H6 and H24 after inclusion) for the prediction of documented bacterial infection (including bacterial and viral coinfection) vs nondocumented bacterial infection (i.e., documented viral infection alone or absence of documented pathogen) for the PCT levels in subgroups of patients with (ATB+) (Panel a-c) and without (ATB-) (Panel d-f) antibiotics at inclusion. Online Resource 5. Receiver operating characteristic (ROC) curves at any time (i.e., H0, H6 and H24 after inclusion) for the prediction of documented bacterial infection (including bacterial and viral coinfection) vs nondocumented bacterial infection (i.e., documented viral infection alone or absence of documented pathogen) for the PCT levels in subgroups of patients with (PNP+) (Panel a-c) or without (PNP-) (Panel d-f) pneumonia at inclusion.",mds,True,findable,0.0,0.0,34.0,1.0,0.0,2021-03-07T04:46:26.000Z,2021-03-07T04:46:26.000Z,figshare.ars,otjm,"Medicine,Microbiology,FOS: Biological sciences,Biotechnology,Immunology,FOS: Clinical medicine,Science Policy,Infectious Diseases,FOS: Health sciences,Virology","[{'subject': 'Medicine'}, {'subject': 'Microbiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Science Policy'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Virology'}]",['994447 Bytes'], +10.6084/m9.figshare.16786741,Additional file 13 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 13. Ethical approval document (English).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:44.000Z,2021-10-12T03:41:45.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['18100 Bytes'], +10.6084/m9.figshare.16851075,Additional file 14 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 14: Fig. S8. NME4 expression is reduced in human breast tumor cell lines with the triple-negative phenotype. NME4 mRNA levels were measured by RT–qPCR in normal-like human breast cell lines, in hormone receptor-positive (HR+) human breast tumor cell lines, and in triple-negative (TN) human breast tumor cell lines. Each data point represents one cell line. Three independent analyses were performed for each cell line. Data are expressed as means ± SEM. ***p< 0.001, **p< 0.01.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:03:44.000Z,2021-10-22T04:03:46.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['931258 Bytes'], +10.6084/m9.figshare.13632735,Additional file 2 of Comparison between regional citrate anticoagulation and heparin for intermittent hemodialysis in ICU patients: a propensity score-matched cohort study,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 2: Table S1. Characteristics of patients in the two study periods.,mds,True,findable,0.0,0.0,26.0,1.0,0.0,2021-01-23T04:31:23.000Z,2021-01-23T04:31:28.000Z,figshare.ars,otjm,"Space Science,Medicine,Biological Sciences not elsewhere classified,Mathematical Sciences not elsewhere classified,Science Policy,Hematology","[{'subject': 'Space Science'}, {'subject': 'Medicine'}, {'subject': 'Biological Sciences not elsewhere classified'}, {'subject': 'Mathematical Sciences not elsewhere classified'}, {'subject': 'Science Policy'}, {'subject': 'Hematology'}]",['20085 Bytes'], +10.6084/m9.figshare.16851096,Additional file 19 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 19: Fig. S13. Hematoxylin and eosin labeling of lung metastases after injection of HeLa clones. Representative H&E labeling of lung metastases after i.v injection of CTR, WT, and KD HeLa clones. Scale bar, 5 mm.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:04:51.000Z,2021-10-22T04:04:53.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['7855720 Bytes'], +10.6084/m9.figshare.13632732,Additional file 1 of Comparison between regional citrate anticoagulation and heparin for intermittent hemodialysis in ICU patients: a propensity score-matched cohort study,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 1: Figure S1. Schematic representation of regional citrate anticoagulation for intermittent hemodialysis.,mds,True,findable,0.0,0.0,26.0,1.0,0.0,2021-01-23T04:31:07.000Z,2021-01-23T04:31:10.000Z,figshare.ars,otjm,"Space Science,Medicine,Biological Sciences not elsewhere classified,Mathematical Sciences not elsewhere classified,Science Policy,Hematology","[{'subject': 'Space Science'}, {'subject': 'Medicine'}, {'subject': 'Biological Sciences not elsewhere classified'}, {'subject': 'Mathematical Sciences not elsewhere classified'}, {'subject': 'Science Policy'}, {'subject': 'Hematology'}]",['86488 Bytes'], +10.6084/m9.figshare.16786735,Additional file 11 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 11. Funding document.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:34.000Z,2021-10-12T03:41:38.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['578011 Bytes'], +10.18709/perscido.2024.02.ds406,Experimental data used in the article Behavioral transition of a fish school in a crowded environment,PerSCiDO,2024.0,,Dataset,,This dataset contains the raw data of the experiments described in the article Behavioral transition of a fish school in a crowded environment. There is one file for each pillar densities. Each files contains the data related to fish from several experiments.,api,True,findable,0.0,0.0,0.0,1.0,0.0,2024-02-09T15:57:16.000Z,2024-02-09T15:57:16.000Z,inist.persyval,vcob,"Physics,Biology","[{'subject': 'Physics', 'subjectScheme': 'http://www.radar-projekt.org/display/Physics'}, {'subject': 'Biology', 'subjectScheme': 'http://www.radar-projekt.org/display/Biology'}]",['100 Mo'],['TSV'] +10.6084/m9.figshare.16851069,Additional file 12 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 12: Fig. S6. Immunoblot and RTqPCR analysis of candidates identified by proteomics. A) Protein levels of five candidates found overexpressed in KD vs. WT by 2D-DIGE proteomics (fascin, γ-synuclein, ISG15, S100A4 and tubulin-βΙΙA) were analyzed by immunoblotting. Two independent clones of each type (indicated as 1 and 2) with two different cultures for each clone were analyzed; α-tubulin is given as loading control. The arrow indicates the correct ISG15 band. B-F) mRNA levels in the WT and KD clones were measured by RTqPCR: fascin (B), γ-synuclein (C), ISG15 (D), S100A4 (E), and N-cadherin involved in cell-cell contacts (F). Data are means ± SEM (n=3). ###p< 0.005 relative to WT. For clone abbreviations see Fig. 1.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:03:29.000Z,2021-10-22T04:03:32.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['9134208 Bytes'], +10.6084/m9.figshare.16851090,Additional file 17 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 17: Fig. S11. MMP activity of ZR75-1 cells depleted for NDPK-D. A) Left panel, representative images of MMP activity by gelatin degradation zymography; the degradation bands of MMP9 are detected at 92 KDa. Right panel, representative Coomassie brilliant blue (CBB) of samples run simultaneously is shown as a loading control. Two different siRNA targeting NDPK-D were used. B) Bar graphs represent the densitometric and statistical analyses of the bands obtained by gelatin zymography shown for MMP9 of five independent biological replicates. Data show means ± SEM (n=5). *p< 0.05 relative to scramble control (Scr).",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:04:11.000Z,2021-10-22T04:04:13.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['1781176 Bytes'], +10.6084/m9.figshare.16786762,Additional file 4 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 4. Study sites.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:09.000Z,2021-10-12T03:42:12.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['13909 Bytes'], +10.6084/m9.figshare.16851144,Additional file 5 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Audiovisual,Creative Commons Attribution 4.0 International,Additional file 5: Movie 4. Videomicroscopy of kinase-dead NDPK-D mutant HeLa clones.,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:07:49.000Z,2021-10-22T04:07:51.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['7942610 Bytes'], +10.6084/m9.figshare.16851102,Additional file 1 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,"Additional file 1: Fig. S1. NDPK protein expression, kinase activity, and subcellular localization in HeLa clones. HeLa cells were stably transfected with empty vector pcDNA4TO (CTR) or constructs for expression of NDPK-D WT (WT), CL-binding deficient R90D (BD) or kinase dead H151N (KD). A) Immunoblot detection of NDPK-D (NME4) in extracts of the transfected HeLa cells with α-tubulin as loading control. B) NDP kinase activity in purified HeLa mitochondria. Values are means ± SEM (n=3). C) HeLa clones stably transfected with empty vector (CTR), or expressing NDPK-D WT, BD or KD mutants, showing identical labeling of mitochondrion-selective dye MitoTracker Red CMXRos (red) and immunolabeled NDPK-D (green). Mitochondrial network details are indicated by faint line boxes magnified in bold line boxes. Scale bar, 10 μm. D) Immunoblot detection of NDPK-A (NME1) and NDPK-B (NME2) in extracts of the transfected HeLa cells with α-tubulin as loading control.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:05:09.000Z,2021-10-22T04:05:12.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['3318853 Bytes'], +10.6084/m9.figshare.16786765,Additional file 5 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 5. Protocol summarized version.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:13.000Z,2021-10-12T03:42:15.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['350276 Bytes'], +10.6084/m9.figshare.14737121,Additional file 1 of Mental health and stress among ICU healthcare professionals in France according to intensity of the COVID-19 epidemic,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 1. Additional figures and tables.,mds,True,findable,0.0,0.0,43.0,1.0,0.0,2021-06-05T04:31:09.000Z,2021-06-05T04:31:10.000Z,figshare.ars,otjm,"Medicine,Biotechnology,Biological Sciences not elsewhere classified,Science Policy","[{'subject': 'Medicine'}, {'subject': 'Biotechnology'}, {'subject': 'Biological Sciences not elsewhere classified'}, {'subject': 'Science Policy'}]",['1844943 Bytes'], +10.5281/zenodo.10640565,"Dataset for the Paper ""Longevity of Artifacts in Leading Parallel and Distributed Systems Conferences: a Review of the State of the Practice in 2023""",Zenodo,2024.0,,Dataset,Creative Commons Attribution 4.0 International,"Dataset used for the paper ""Longevity of Artifacts in Leading Parallel and Distributed Systems Conferences: a Review of the State of the Practice in 2023"" submitted at REP'24. + +The associated analysis scripts are available on Software-Heritage: https://archive.softwareheritage.org/swh:1:dir:f755a41eb18045b3367ace8ebecce269a27ce554;origin=https://github.com/GuilloteauQ/artefact-lifetime;visit=swh:1:snp:0b8abfb72a9978fe2641d71f459863c34e915b6d;anchor=swh:1:rev:0b10910a576be7e057a60d6eb9929c688933f78b",api,True,findable,0.0,0.0,0.0,0.0,1.0,2024-02-09T14:40:27.000Z,2024-02-09T14:40:27.000Z,cern.zenodo,cern,,,, +10.6084/m9.figshare.16851150,Additional file 6 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 6: Fig. S2. Invasion assay of HeLa cells depleted for NDPK-A. A) Phase-contrast microscopy of control (scramble, Scr) and NDPK-A-depleted HeLa cells 72 h post-transfection. Note: Silenced cells are scattered as compared to control. B) Control siRNA and NDPK-A depleted (siNME1-1, siNME1-2) HeLa cells were tested for their ability to invade native type I collagen in a 24 h invasion assay. Data are means ± SEM (2 independent experiments). C) Activation status of Rac1 (Rac1-GTP) and PAK (phosphorylated PAK, pPAK) of NDPK-A depleted (siNME1-1, siNME1-2) HeLa cells as compared to total Rac1 and PAK protein, and NDPK-A protein levels. $$p< 0.01.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:08:01.000Z,2021-10-22T04:08:04.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['16028064 Bytes'], +10.6084/m9.figshare.16851063,Additional file 10 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,"Additional file 10: Table S1. Differently expressed proteins in HeLa clones expressing the mutant and the wild type NDPK-D. The full protein names are from the UniProt database. Accession number are from UniProt (Acc._HUMAN) and SwissProt databases. The one-way analysis of variance (ANOVA) test, followed by a Tukey’s multiple comparison test, was used to determine protein spots significantly different between analyses. p-values were calculated across pairwise comparisons (clones KD vs WT, BD vs WT and CTR vs WT) and considered significant when < 0.05. Proteins were ordered following the fold changes in the KD vs WT comparison. * Two identifications for the same spot. Bold values, fold change statistically significant (p< 0.05) and ≥1.3. Italic values, fold change not statistically valid (p > 0.05) or ≤1.3. § Proteins reported to present a mitochondrial localization (UniProt annotation) are indicated by M.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:03:05.000Z,2021-10-22T04:03:07.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['84459 Bytes'], +10.6084/m9.figshare.16786753,Additional file 1 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 1. Study protocol version 3.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:55.000Z,2021-10-12T03:41:56.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['656137 Bytes'], +10.6084/m9.figshare.16851066,Additional file 11 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Dataset,Creative Commons Attribution 4.0 International,"Additional file 11: Table S2. Mass spectrometry identification data for spots of interest. For each protein identified in a spot of interest, the table gives: the protein full name, the accession number from UniProt database, the gene name, the Mascot scores, the number of unique peptides, the calculated emPAI (Exponentially Modified Protein Abundance Index) value, the experimental and theoretical pI (isoelectric point) and molecular weight (Mw) and the sequence coverage (%) (see: http://www.matrixscience.com ). * Two identifications for the same spot.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:03:18.000Z,2021-10-22T04:03:21.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['32700 Bytes'], +10.6084/m9.figshare.16786756,Additional file 2 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 2. Study protocol version 4.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:57.000Z,2021-10-12T03:41:58.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['2087346 Bytes'], +10.6084/m9.figshare.16786744,Additional file 14 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 14. Consent form (patients).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:43.000Z,2021-10-12T03:41:46.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['211098 Bytes'], +10.6084/m9.figshare.16851084,Additional file 16 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,Additional file 16: Fig. S10. NDPK-D protein expression of ZR75-1 cells. Immunoblot detection of NDPK-D from ZR75-1 cells depleted of NDPK-D by siRNA. Alpha-tubulin was used as loading control.,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:04:03.000Z,2021-10-22T04:04:04.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['1659398 Bytes'], +10.6084/m9.figshare.16786738,Additional file 12 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 12. Ethical approval document (French).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:34.000Z,2021-10-12T03:41:37.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['367954 Bytes'], +10.6084/m9.figshare.16786750,Additional file 16 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 16. Confirmation form (patient).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:54.000Z,2021-10-12T03:41:56.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['215211 Bytes'], +10.6084/m9.figshare.16786768,Additional file 6 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 6. Case report form.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:16.000Z,2021-10-12T03:42:17.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['1140940 Bytes'], +10.5281/zenodo.10640566,"Dataset for the Paper ""Longevity of Artifacts in Leading Parallel and Distributed Systems Conferences: a Review of the State of the Practice in 2023""",Zenodo,2024.0,,Dataset,Creative Commons Attribution 4.0 International,"Dataset used for the paper ""Longevity of Artifacts in Leading Parallel and Distributed Systems Conferences: a Review of the State of the Practice in 2023"" submitted at REP'24. + +The associated analysis scripts are available on Software-Heritage: https://archive.softwareheritage.org/swh:1:dir:f755a41eb18045b3367ace8ebecce269a27ce554;origin=https://github.com/GuilloteauQ/artefact-lifetime;visit=swh:1:snp:0b8abfb72a9978fe2641d71f459863c34e915b6d;anchor=swh:1:rev:0b10910a576be7e057a60d6eb9929c688933f78b",api,True,findable,0.0,0.0,0.0,0.0,0.0,2024-02-09T14:40:27.000Z,2024-02-09T14:40:27.000Z,cern.zenodo,cern,,,, +10.6084/m9.figshare.16851156,Additional file 8 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 8: Fig. S4. Proliferation assays of HeLa clones. A) Cell proliferation of HeLa clones (CTR, WT, BD, KD; for abbr. see Fig. 1) was examined between 12 and 36 h using the xCELLigence System. Proliferation rate (slope) was determined by the RTCA Software supplied with the instrument. Values are means ± SEM (n=3). B) Levels of proliferation markers, cyclin A, cyclin B1 and PCNA with α-tubulin as loading control were analyzed by Western blotting of HeLa clone extracts. ***p< 0.005 relative to control/empty vector (CTR); ###p< 0.005 relative to wild-type (WT).",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:08:23.000Z,2021-10-22T04:08:25.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['2340706 Bytes'], +10.6084/m9.figshare.17006979,Additional file 1 of Targeted high mean arterial pressure aggravates cerebral hemodynamics after extracorporeal resuscitation in swine,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,"Additional file 1. Supplemental Table I: P values of the contingency table of the two-way analysis of variance (ANOVA) for repeated measures with group, time effect and group x time interaction effects for the different investigated parameters after cardiac arrest.",mds,True,findable,0.0,0.0,17.0,1.0,0.0,2021-11-14T04:19:23.000Z,2021-11-14T04:19:24.000Z,figshare.ars,otjm,"Medicine,Neuroscience,Biological Sciences not elsewhere classified","[{'subject': 'Medicine'}, {'subject': 'Neuroscience'}, {'subject': 'Biological Sciences not elsewhere classified'}]",['30160 Bytes'], +10.6084/m9.figshare.16851108,Additional file 21 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 21: Fig. S14. Association between NME4, NME1 and markers of EMT in human breast tumors. NME4 and NME1 status in the cohort of 526 human breast tumor clinical samples: mRNA correlation between NME4 and CDH1 (A), NME4 and KRT18 (B), NME1 and CDH1 (C), NME1 and KRT18 (D), NME1 and VIM (E).",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:05:42.000Z,2021-10-22T04:05:45.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['19521989 Bytes'], +10.6084/m9.figshare.16851111,Additional file 22 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,"Additional file 22: Fig. S15. Association between NME4 and regulators of EMT in the human breast tumor METABRIC database. The database (1904 human breast tumors) was retrieved for mRNA expression of NME4 and EMT markers and their correlation analyzed: epithelial markers, CDH1 and KRT18 (A); mesenchymal markers, CDH2 and VIM (B); EMT drivers, ZEB1, ZEB2 (C), SNAI1, SNAI2 (D), TWIST1, TWIST2 (E), and the EMT score (F). Correlation coefficients are summarized in (G).",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:05:50.000Z,2021-10-22T04:05:52.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['715670 Bytes'], +10.6084/m9.figshare.16851117,Additional file 24 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 24: Fig. S16. Association between NME4 and markers of EMT and tumor invasion in the human breast tumor TCGA database. The database was retrieved for mRNA expression of NME4 and EMT (KRT18, CDH2, ZEB2, CTNNB1, CLDN3) and tumor invasion (MMP7, ADAM17, ROCK2, CFL2, MYO5A) markers and their correlation analyzed (see Additional file 23: Table S4 ).",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:06:02.000Z,2021-10-22T04:06:05.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['18443258 Bytes'], +10.6084/m9.figshare.16851093,Additional file 18 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,Additional file 18: Fig. S12. Mitochondrial potential and mitochondrial stress of ZR75-1 cells depleted for NDPK-D. A) Mitochondrial membrane potential was measured by staining ZR75-1 cells depleted for NDPK-D with 200 nM TMRE and the percentage of fluorescence intensity of three independent biological replicates was plotted. Data show means ± SEM of three independent biological replicates imaged. *p< 0.05 relative to scramble control (Scr). B) Mitochondrial oxidative state was determined by staining the same cell lines with 5 μM MitoSOXTM and the percentage of fluorescence intensity of three independent biological replicates was plotted. Data show means ± SEM of three independent biological replicates imaged. *p< 0.05 relative to scramble control (Scr).,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:04:23.000Z,2021-10-22T04:04:25.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['1198593 Bytes'], +10.6084/m9.figshare.16851153,Additional file 7 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 7: Fig. S3. 14-days invasion assay of NDPK-D HeLa clones. Clones WT (left) and KD (right) are shown (for abbreviations see Fig. 1). Cells were seeded on the surface of collagen type I indicated by an arrow. Representative cross-sections of the collagen gel after a 14-day culture period stained with hematoxylin and eosin are shown (scale bar, 100 μm).",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:08:15.000Z,2021-10-22T04:08:17.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['6763524 Bytes'], +10.6084/m9.figshare.16786747,Additional file 15 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 15. Consent form (surrogates).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:50.000Z,2021-10-12T03:42:51.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['217073 Bytes'], +10.6084/m9.figshare.c.7068560,Blood MMP-9 measured at 2 years after lung transplantation as a prognostic biomarker of chronic lung allograft dysfunction,figshare,2024.0,,Collection,Creative Commons Attribution 4.0 International,"Abstract Background Long-term outcomes of lung transplantation (LTx) remain hampered by chronic lung allograft dysfunction (CLAD). Matrix metalloproteinase 9 (MMP-9) is a secretory endopeptidase identified as a key mediator in fibrosis processes associated with CLAD. The objective of this study was to investigate whether plasma MMP9 levels may be prognostic of CLAD development. Methods Participants were selected from the Cohort in Lung Transplantation (COLT) for which a biocollection was associated. We considered two time points, year 1 (Y1) and year 2 (Y2) post-transplantation, for plasma MMP-9 measurements. We analysed stable recipients at those time points, comparing those who would develop a CLAD within the 2 years following the measurement to those who would remain stable 2 years after. Results MMP-9 levels at Y1 were not significantly different between the CLAD and stable groups (230 ng/ml vs. 160 ng/ml, p = 0.4). For the Y2 analysis, 129 recipients were included, of whom 50 developed CLAD within 2 years and 79 remained stable within 2 years. MMP-9 plasma median concentrations were higher in recipients who then developed CLAD than in the stable group (230 ng/ml vs. 118 ng/ml, p = 0.003). In the multivariate analysis, the Y2 MMP-9 level was independently associated with CLAD, with an average increase of 150 ng/ml (95% CI [0–253], p = 0.05) compared to that in the stable group. The Y2 ROC curve revealed a discriminating capacity of blood MMP-9 with an area under the curve of 66%. Conclusion Plasmatic MMP-9 levels measured 2 years after lung transplantation have prognostic value for CLAD.",mds,True,findable,0.0,0.0,0.0,0.0,0.0,2024-02-10T04:41:44.000Z,2024-02-10T04:41:45.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Ecology,FOS: Biological sciences,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Ecology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}]",, +10.5061/dryad.b2rbnzsp7,Data from: Camera traps reveal seasonal variation in activity and occupancy of the Alpine mountain hare (Lepus timidus varronis),Dryad,2024.0,en,Dataset,Creative Commons Zero v1.0 Universal,"Mountain hare is a cold-adapted species threatened by climate change, but + despite its emblematic nature, our understanding of the causes of + population decline remains limited. Camera traps are increasingly used in + ecology as a tool for monitoring animal populations at large spatial and + temporal scales. In mountain environments where field work is constrained + by difficult access and harsh conditions, camera traps constitute a + promising tool for surveying rare and elusive species such as the mountain + hare. Our study explored the use of camera traps as a tool for studying + seasonal habitat occupancy and daily activity patterns of the mountain + hare, in order to carry out long-term monitoring of populations. We + installed 46 camera traps along elevation gradients in the Mont-Blanc + massif (France) from January 2018 to June 2022. We measured habitat + variables at each camera trap site in order to define vegetation + composition and habitat structure. We performed multi-season and + single-season occupancy models to respectively describe habitat occupancy + of the mountain hare throughout the year and identify the environmental + variables influencing mountain hare presence during the breeding season. + Mountain hares occupy coniferous forest in winter, and then switch to + mixed areas of shrubland and grassland above treeline in spring and the + beginning of summer. In spring, occupancy probability of the mountain hare + increases with relative cover of mixed low shrub and herbaceous layer + (i.e. the 10-40 cm vegetation layer), suggesting a link to food resources + and protection from predation. Our results also confirm the nocturnal and + crepuscular activity of the mountain hare during the breeding season, and + strictly nocturnal activity in winter. Our results demonstrate the + efficiency of camera traps as tools for monitoring mountain hare habitat + occupancy in mountain environments and underline the importance of diverse + habitat mosaics for the preservation of the species.",mds,True,findable,0.0,0.0,0.0,0.0,0.0,2024-02-07T20:21:15.000Z,2024-02-07T20:21:16.000Z,dryad.dryad,dryad,"FOS: Natural sciences,FOS: Natural sciences,mountain hare,Camera traps,altitudinal migration,habitat,occupancy,Activity pattern","[{'subject': 'FOS: Natural sciences', 'subjectScheme': 'fos'}, {'subject': 'FOS: Natural sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'mountain hare'}, {'subject': 'Camera traps'}, {'subject': 'altitudinal migration'}, {'subject': 'habitat'}, {'subject': 'occupancy'}, {'subject': 'Activity pattern'}]",['159625 bytes'], +10.5281/zenodo.10639557,Unite! white paper. A new University open science and innovation governance model and policy for a sustainable world,Unite! Alliance Publications,2023.0,en,Text,Creative Commons Attribution 4.0 International,"This white paper is a practical tool aimed at contributing to the transition from modern science to open science in universities and European Universities Alliances (EUAs) by 2030. This white paper provides evidence-based policy guidelines for university managers, policymakers, and funders to enhance efficient open science and innovation management at universities. ",api,True,findable,0.0,0.0,0.0,0.0,0.0,2024-02-09T12:19:37.000Z,2024-02-09T12:19:38.000Z,cern.zenodo,cern,"open science,open science and innovation management,university governance,open innovation,science and innovation policy,European university alliances","[{'subject': 'open science'}, {'subject': 'open science and innovation management'}, {'subject': 'university governance'}, {'subject': 'open innovation'}, {'subject': 'science and innovation policy'}, {'subject': 'European university alliances'}]",, +10.6084/m9.figshare.16786774,Additional file 8 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 8. IES-R questionnaire (French version).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:34.000Z,2021-10-12T03:42:37.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['25288 Bytes'], +10.6084/m9.figshare.16851132,Additional file 2 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Audiovisual,Creative Commons Attribution 4.0 International,Additional file 2: Movie 1. Videomicroscopy of control HeLa clones.,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:06:52.000Z,2021-10-22T04:06:54.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['7577616 Bytes'], +10.6084/m9.figshare.16786777,Additional file 9 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 9. SF36 questionnaire (French version).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:34.000Z,2021-10-12T03:42:38.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['20151 Bytes'], +10.6084/m9.figshare.16851072,Additional file 13 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 13: Fig. S7. Mitochondrial network structure in live-stained HeLa clones. HeLa cells harboring empty vector control (CTR) or expressing wild-type NDPK-D (WT) or mutant NDPK-D (BD, KD) were labeled with 100 nM Mitotracker Green. Representative confocal images are shown together with a 2.7-fold magnified detail to the right. Scale bar, 20 μm.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:03:41.000Z,2021-10-22T04:03:43.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['4286346 Bytes'], +10.6084/m9.figshare.16851078,Additional file 15 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 15: Fig. S9. NDPK-D protein expression and mitochondrial localization in MDA-MB-231 clones. A) Immunoblot detection of NDPK-D from MDA-MB-231 cells stably transfected with empty pcDNA4TO (CTR) or constructs for expression of NDPK-D WT, BD or KD. Alpha-tubulin was used as loading control. B) MDA-MB-231 clones stably transfected with empty vector (CTR), or expressing NDPK-D WT or mutants BD or KD, showing labeling of mitochondrion-selective dye MitoTracker Red CMXRos (red) and immunolabeled NDPK-D (green). Mitochondrial network details are indicated by faint line boxes magnified in bold line boxes. Scale bar, 10 μm.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:03:52.000Z,2021-10-22T04:03:54.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['15915762 Bytes'], +10.6084/m9.figshare.16786732,Additional file 10 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 10. DSMB charter.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:41:27.000Z,2021-10-12T03:41:29.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['65108 Bytes'], +10.57745/rjx9xh,Replication Data for: WHOIS Right? An Analisis of WHOIS and RDAP Consistency,Recherche Data Gouv,2024.0,,Dataset,,"This data was collected during the research work that led to the publication of the article ""WHOIS Right? An Analysis of WHOIS and RDAP Consistency"", published at Passive and Active Measurements 2024. To compare the consistency of registration data accross the WHOIS and RDAP data sources, we selected a random subset of 55M domain names that had both WHOIS and RDAP entries, we collected and parsed their multiple entries. This dataset contains the collected parsed data of this study: 156M parsed WHOIS and RDAP entries, across 55M domains.",mds,True,findable,1.0,0.0,0.0,0.0,0.0,2024-01-26T07:54:26.000Z,2024-02-06T09:24:43.000Z,rdg.prod,rdg,,,, +10.6084/m9.figshare.16851114,Additional file 23 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 23: Table S4. Association between NME4 and EMT and tumor invasion marker expression in breast tumors. The relationship between NME4 expression and several key players of EMT and tumor invasion was studied in human breast tumors from the TCGA database.,mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:05:57.000Z,2021-10-22T04:05:59.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['15547 Bytes'], +10.6084/m9.figshare.16786771,Additional file 7 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 7. TMoCA questionnaire (French version).,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:28.000Z,2021-10-12T03:42:29.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['68490 Bytes'], +10.6084/m9.figshare.25200581,Additional file 1 of Blood MMP-9 measured at 2 years after lung transplantation as a prognostic biomarker of chronic lung allograft dysfunction,figshare,2024.0,,Text,Creative Commons Attribution 4.0 International,"Additional file 1: S1. COLT study protocol. S2. Description of variables of interest. Figure S1. Study protocol. Figure S2. Comparison of MMP-9 blood levels of Y2 analysis according to CLAD phenotypes. Figure S3. Precision-Recall (A) and ROC (B) curves for the Y1 MMP-9 analysis. Figure S4. Comparison of MMP-9 blood levels of Y2 analysis according to CLAD phenotypes. Figure S5. Longitudinal analysis of MMP-9 blood levels for recipients with available samples before transplantation, at Y1 and Y2.",mds,True,findable,0.0,0.0,24.0,0.0,0.0,2024-02-10T04:41:43.000Z,2024-02-10T04:41:43.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Ecology,FOS: Biological sciences,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Ecology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}]",['1025399 Bytes'], +10.6084/m9.figshare.16851159,Additional file 9 of The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor,figshare,2021.0,,Image,Creative Commons Attribution 4.0 International,"Additional file 9: Fig. S5. Pro-invasive signaling pathways in HeLa clones. A, B) Mutant NDPK-D cells were tested for their ability to invade native type I collagen in the presence of pharmacological inhibitors of the PI3K (GSK2126458), Src (MA475271), p38 (SB203580), JNK (SP600125) signaling pathways (A), and epidermal growth factor receptor (EGFR) (lapatinib) (B), all at two different concentrations (1 and 10 μM). C, D) Activation of the EGFR signaling pathway after 10 nM EGF stimulation analyzed by immunoblotting with phospho-specific and total protein antibodies as indicated, with α-tubulin as loading control; (C) clones CTR, WT, BD; (D) clones CTR, WT, KD. Note: Activation of the EGF pathway is seen by phosphorylation of EGFR (at Tyr1080, activatory), ERK1/2, AKT, and GSK3β (at Ser9, inhibitory). $$p< 0.01 and $$$p< 0.005. For clone abbreviations see Fig. 1.",mds,True,findable,0.0,0.0,93.0,1.0,0.0,2021-10-22T04:08:25.000Z,2021-10-22T04:08:27.000Z,figshare.ars,otjm,"Biophysics,Biochemistry,Medicine,Cell Biology,Genetics,FOS: Biological sciences,Molecular Biology,Physiology,Immunology,FOS: Clinical medicine,Developmental Biology,Cancer,Hematology,Infectious Diseases,FOS: Health sciences,Computational Biology","[{'subject': 'Biophysics'}, {'subject': 'Biochemistry'}, {'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Genetics'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Molecular Biology'}, {'subject': 'Physiology'}, {'subject': 'Immunology'}, {'subject': 'FOS: Clinical medicine', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Developmental Biology'}, {'subject': 'Cancer'}, {'subject': 'Hematology'}, {'subject': 'Infectious Diseases'}, {'subject': 'FOS: Health sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Computational Biology'}]",['6708752 Bytes'], +10.6084/m9.figshare.16786759,Additional file 3 of Open-label randomized controlled trial of ultra-low tidal ventilation without extracorporeal circulation in patients with COVID-19 pneumonia and moderate to severe ARDS: study protocol for the VT4COVID trial,figshare,2021.0,,Text,Creative Commons Attribution 4.0 International,Additional file 3. WHO Trial Registration Dataset.,mds,True,findable,0.0,0.0,16.0,1.0,0.0,2021-10-12T03:42:01.000Z,2021-10-12T03:42:02.000Z,figshare.ars,otjm,"Medicine,Cell Biology,Physiology,FOS: Biological sciences,Biotechnology,Cancer,Mental Health,Computational Biology","[{'subject': 'Medicine'}, {'subject': 'Cell Biology'}, {'subject': 'Physiology'}, {'subject': 'FOS: Biological sciences', 'schemeUri': 'http://www.oecd.org/science/inno/38235147.pdf', 'subjectScheme': 'Fields of Science and Technology (FOS)'}, {'subject': 'Biotechnology'}, {'subject': 'Cancer'}, {'subject': 'Mental Health'}, {'subject': 'Computational Biology'}]",['29546 Bytes'], +10.5281/zenodo.10635624,Unite! white paper. A new University open science and innovation governance model and policy for a sustainable world,Unite! Alliance Publications,2023.0,en,Text,Creative Commons Attribution 4.0 International,"This white paper is a practical tool aimed at contributing to the transition from modern science to open science in universities and European Universities Alliances (EUAs) by 2030. This white paper provides evidence-based policy guidelines for university managers, policymakers, and funders to enhance efficient open science and innovation management at universities. ",api,True,findable,0.0,0.0,0.0,0.0,2.0,2024-02-09T10:57:13.000Z,2024-02-09T10:57:13.000Z,cern.zenodo,cern,"open science,open science and innovation management,university governance,open innovation,science and innovation policy,European university alliances","[{'subject': 'open science'}, {'subject': 'open science and innovation management'}, {'subject': 'university governance'}, {'subject': 'open innovation'}, {'subject': 'science and innovation policy'}, {'subject': 'European university alliances'}]",,