intro-open-source-sciences

ipynb/300_intro-open-source-sciences.ipynb

+%% Cell type:markdown id: tags:
+
+# Dynamics Open-Source in Sciences
+
+During the last decades:
+
+- For scientific computing and computing clusters: Linux
+- For scientific edition: LaTeX
+
+During the last years, real boom of this dynamics.
+
+- Open-Source is very strong independently of sciences
+- Sciences use more and more Open-Source tools and methods
+- Open-science
+
+%% Cell type:markdown id: tags:
+
+### Github and Gitlab
+
+Very popular web platforms to share and develop codes.
+
+### Open-Source communities around languages
+
+C++, Fortran, Python, R, Julia
+
+On many aspects stronger than the close source equivalent (for example Matlab)
+
+%% Cell type:markdown id: tags:
+
+### A Challenge for you!
+
+(for the course Instabilities and turbulence)
+
+- A report in LaTex with 2 parts:
+
+  1. your own study with your own figures and tables on what we'll learned on simple dynamical system,
+  2. A presentation on another subject of your choice on fluid instabilities and/or turbulence.
+  
+- Your own repository on https://gricad-gitlab.univ-grenoble-alpes.fr/ containing the source of the code.
+
+You will be marked on the result of the following commands so this has to work and produce the pdf `report.pdf`:
+
+```bash
+
+hg clone https://gricad-gitlab.univ-grenoble-alpes.fr/yourusername/report_research_project_template
+cd report_research_project_template
+make cleanall
+make
+evince report.pdf &
+```
+
+

ipynb/make_index.py

@@ -15,7 +15,8 @@ titles = {
     "Numpy scipy": "Numpy / Scipy",
     "Parallel": "Parallel computing (CPU bounded)",
     "Mercurial and gitlab": "Bonus: versioning with Mercurial and Gitlab",
-    "Environnement": "Bonus: interpreters, distributions, packages"
+    "Environnement": "Bonus: interpreters, distributions, packages",
+    "Intro-open-source-sciences": "Introduction Dynamics Open-Source in Sciences",
 }
 
 this_dir = Path(__file__).parent