Improve 300_intro-open-source-sciences.ipynb

ipynb/300_intro-open-source-sciences.ipynb

 %% Cell type:markdown id: tags:
 
-# Dynamics Open-Source in Sciences
+# Open-source dynamics in Sciences
 
 During the last decades:
 
 - For scientific computing and computing clusters: Linux
 - For scientific edition: LaTeX
 
 During the last years, real boom of this dynamics.
 
-- Open-Source is very strong independently of sciences
-- Sciences use more and more Open-Source tools and methods
+- Open-source is very strong independently of sciences (web, data, artificial intelligence, ...)
+- Open-source tools and methods are more and more used in science
 - Open-science
 
 %% Cell type:markdown id: tags:
 
 ### Github and Gitlab
 
 Very popular web platforms to share and develop codes.
 
+- https://github.com/ Millions on projects and users
+
+- Gitlab: open-source alternative that can be installed by any people, in particular Universities.
+
+  We can use the UGA instance: https://gricad-gitlab.univ-grenoble-alpes.fr/
+
 ### Open-Source communities around languages
 
-C++, Fortran, Python, R, Julia
+C++, Fortran, Python, R, Julia, ...
 
-On many aspects stronger than the close source equivalent (for example Matlab)
+On many aspects stronger than the close-source equivalents (for example Matlab)
 
 %% Cell type:markdown id: tags:
 
 ### A Challenge for you!
 
 (for the course Instabilities and turbulence)
 
-- A report in LaTex with 2 parts:
+You will have to:
+
+- Make a report written in LaTeX with 2 parts:
 
-  1. your own study with your own figures and tables on what we'll learned on simple dynamical system,
+  1. your own study with your own figures and tables on what we've learned on simple dynamical system (we will work on that!),
   2. A presentation on another subject of your choice on fluid instabilities and/or turbulence.
   
-- Your own repository on https://gricad-gitlab.univ-grenoble-alpes.fr/ containing the source of the code.
+- Work on your own repository on https://gricad-gitlab.univ-grenoble-alpes.fr/ containing the source of the report.
 
 You will be marked on the result of the following commands so this has to work and produce the pdf `report.pdf`:
 
 ```bash
 
-hg clone https://gricad-gitlab.univ-grenoble-alpes.fr/yourusername/report_research_project_template
+hg clone https://gricad-gitlab.univ-grenoble-alpes.fr/yourusername/report_research_project_template.git
 cd report_research_project_template
 make cleanall
 make
 evince report.pdf &
 ```
 
+Of course, replace `yourusername` by your UGA username. 
+
+Don't worry, we'll learn everything you need to do that and to understand how it works!
+
+A first step is to fork the project https://gricad-gitlab.univ-grenoble-alpes.fr/augierpi/report_research_project_template.
+
+- Login on https://gricad-gitlab.univ-grenoble-alpes.fr
+- Go to https://gricad-gitlab.univ-grenoble-alpes.fr/augierpi/report_research_project_template
+- Click on the `Fork` button!
+
+When it's done, please send a message in [this issue](https://gricad-gitlab.univ-grenoble-alpes.fr/augierpi/coursem1_pa_instabilities_turbulence/-/issues/2) with the URL of your repository.
 

ipynb/make_index.py

@@ -16,7 +16,9 @@ titles = {
     "Parallel": "Parallel computing (CPU bounded)",
     "Mercurial and gitlab": "Bonus: versioning with Mercurial and Gitlab",
     "Environnement": "Bonus: interpreters, distributions, packages",
-    "Intro-open-source-sciences": "Introduction Dynamics Open-Source in Sciences",
+    "Intro-open-source-sciences": "Introduction open-source in science",
+
+
 }
 
 this_dir = Path(__file__).parent