Commit 4f42e317 authored by P-A Bouttier's avatar P-A Bouttier
Browse files

change source for github development branch for the abtools python package

parent 8b82ef2b
......@@ -768,7 +768,7 @@
(propagated-inputs
`(("python-celery" ,python-celery)
("python-ete3" ,python-ete3)
("gcc-toolchain" ,gcc-toolchain)
("gcc-toolchain" ,gcc-toolchain)
("python-matplotlib" ,python-matplotlib)
("python-natsort" ,python-natsort)
("python-numpy" ,python-numpy)
......@@ -793,30 +793,34 @@
(license #f)))
(define-public python-abtools
(let ((branch "development")
(commit "9a26a54823d68f819e7fc222a307159afde1fd2b"))
(package
(name "python-abtools")
(version "0.1.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "abtools" version))
(sha256
(base32
"1344qqjqd5a6vh6540f1mdzy5ahv7sxqp1fkgvj60j661sw2hm8c"))))
(version (git-version "1" branch commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "git://github.com/uds-psl/autosubst")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "1cl0bp96bk6lplbl7n5c703vd3gvbs5mvf2qrf8q333kkqd7jqq4"))))
(build-system python-build-system)
(arguments
'(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-before 'build 'fix-old-pip-req
(lambda _
(substitute* "setup.py"
(("from pip.req import parse_requirements")
"from pip._internal.req import parse_requirements"))
#t)))))
; (arguments
; '(#:tests? #f
; #:phases
; (modify-phases %standard-phases
; (add-before 'build 'fix-old-pip-req
; (lambda _
; (substitute* "setup.py"
; (("from pip.req import parse_requirements")
; "from pip._internal.req import parse_requirements"))
; #t)))))
(propagated-inputs
`(("python-biopython" ,python-biopython)
("python-celery" ,python-celery)
("python-abutils" ,python-abutils)
("python-ete3" ,python-ete3)
("python-matplotlib" ,python-matplotlib)
("python-nose" ,python-nose)
......@@ -832,4 +836,4 @@
"Utilities for analysis of antibody NGS data")
(description
"Utilities for analysis of antibody NGS data")
(license #f)))
\ No newline at end of file
(license #f))))
\ No newline at end of file
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