diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index d97fe2eeb4a96e802b19d535d453468ea4ea194e..39038abc6f09398a71a036350241f83e5cb26e91 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -1,9 +1,7 @@
---
stages:
- image
- - doc
- module
- - deploy
variables:
DOCKER_IMAGE_URL: gricad-registry.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12/ci/default:stable
@@ -15,9 +13,9 @@ image: $DOCKER_IMAGE_URL
# it is quite unnecessary to run on every invocation.
image:build:
stage: image
- rules:
- - if: '$CI_PIPELINE_SOURCE == "schedule"'
- - if: '$CI_BUILD_IMAGES == "1"'
+ # rules:
+ # - if: '$CI_PIPELINE_SOURCE == "schedule"'
+ # - if: '$CI_BUILD_IMAGES == "1"'
image:
name: gcr.io/kaniko-project/executor:debug
entrypoint: [ "" ]
@@ -62,27 +60,3 @@ module:build:
paths:
- 3.11.2
expire_in: 5 days
-
-doc:build_html:
- stage: doc
- needs:
- - job: "image:build"
- optional: true
- script:
- - nox -s book
- - rm -rf public
- - mv book/_build/html public
- artifacts:
- when: always
- paths:
- - public
-
-pages:
- stage: deploy
- script:
- - echo "Publish to Gitlab pages"
- artifacts:
- paths:
- - public
- only:
- - main
diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
index 6fd82e64353e65bd39b2dfd9fde0c768735f456a..cff79f2cb60e1f2763027e6055e8c3e0718155c3 100644
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -2,7 +2,7 @@
## How to update the module?
-1. Clone this repo locally on a Debian 11 (Bullseye).
+1. Clone this repo locally on a Debian 12 (Bookworm).
2. Install PDM and Nox for example as explained in
[the documentation](https://legi.gricad-pages.univ-grenoble-alpes.fr/soft/trokata/softsync-python-debian12/setup-apps.html).
@@ -22,7 +22,7 @@ when the new Docker image has been created (before merging).
## How to update the documentation?
-1. Clone this repo locally on a Debian 11 (Bullseye).
+1. Clone this repo locally on a Debian 12 (Bookworm).
2. Install Nox for example as explained in
[the documentation](https://legi.gricad-pages.univ-grenoble-alpes.fr/soft/trokata/softsync-python-debian12/setup-apps.html).
diff --git a/Makefile b/Makefile
index 35df45f9f60b3ce423f3364ff2be14f7a620a448..9b0fd80022ed37fac6b7f52e1a536cea763429ad 100644
--- a/Makefile
+++ b/Makefile
@@ -7,9 +7,3 @@ lock:
test:
pdm run nox -s test --no-venv
-
-doc:
- nox -s book -R
-
-format:
- mdformat *.md book/*.md
diff --git a/README.md b/README.md
index 808d389c5184230c4901a40fd66386b07c6b704b..4dadb87c25a6d3d9b2225409109ffdb739128da9 100644
--- a/README.md
+++ b/README.md
@@ -1,24 +1,17 @@
-# Source to create a Python module on Debian 11
+# Source to create a Python module on Debian 12
-The goal of this repository are two-fold:
-
-- Create in the CI a tar archive of a virtual environment `/opt/python/3.11.2`. This
- environment can be activated at LEGI with `module load python/3.11.2`.
-
- The latest version can be downloaded at this address:
- <https://gricad-gitlab.univ-grenoble-alpes.fr/api/v4/projects/26829/jobs/artifacts/main/download?job=module:build>
-
-- Build
- [a small website](https://legi.gricad-pages.univ-grenoble-alpes.fr/soft/trokata/softsync-python-debian12)
- presenting few methods to use Python at LEGI.
+The goal of this repository is to create in the CI a tar archive of a virtual
+environment `/opt/python/3.11.2`. This environment can be activated at LEGI
+with `module load python/3.11.2`.
+The latest version can be downloaded at this address:
+<https://gricad-gitlab.univ-grenoble-alpes.fr/api/v4/projects/27252/jobs/artifacts/main/download?job=module:build>
## A problem with the module at LEGI?
Please feel an issue
[here](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12/-/issues).
-
## Authors
Main authors:
@@ -30,7 +23,6 @@ Contributors:
* Gabriel Moreau, UMR 5519 / CNRS UGA G-INP, Grenoble, France
* Cyrille Bonamy, UMR 5519 / CNRS UGA G-INP, Grenoble, France
-
## Copyright
Copyright (C) 2024, LEGI UMR 5519 / CNRS UGA G-INP, Grenoble, France
diff --git a/book/_config.yml b/book/_config.yml
deleted file mode 100644
index c17d770888dacde7d310e2e1601ea16a646326ee..0000000000000000000000000000000000000000
--- a/book/_config.yml
+++ /dev/null
@@ -1,39 +0,0 @@
-# Book settings
-# Learn more at https://jupyterbook.org/customize/config.html
-
-title: My sample book
-author: The Jupyter Book Community
-logo: logo_LEGI.jpg
-
-# Force re-execution of notebooks on each build.
-# See https://jupyterbook.org/content/execute.html
-execute:
- execute_notebooks: force
-
-# Define the name of the latex output file for PDF builds
-latex:
- latex_documents:
- targetname: book.tex
-
-# Add a bibtex file so that we can create citations
-# bibtex_bibfiles:
-# - references.bib
-
-# Information about where the book exists on the web
-repository:
- url: https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12
- path_to_book: book # Optional path to your book, relative to the repository root
- branch: main # Which branch of the repository should be used when creating links (optional)
-
-# Add GitHub buttons to your book
-# See https://jupyterbook.org/customize/config.html#add-a-link-to-your-repository
-html:
- use_issues_button: true
- use_repository_button: true
-
-sphinx:
- config:
- # To avoid warning about default changing due to
- # https://github.com/pydata/pydata-sphinx-theme/issues/1492
- html_theme_options:
- navigation_with_keys: false
diff --git a/book/_toc.yml b/book/_toc.yml
deleted file mode 100644
index 66443fa7fc81fd5198967d93a8400dca9b6a572e..0000000000000000000000000000000000000000
--- a/book/_toc.yml
+++ /dev/null
@@ -1,12 +0,0 @@
-# Table of contents
-# Learn more at https://jupyterbook.org/customize/toc.html
-
-format: jb-book
-root: intro
-chapters:
-- file: aliases.md
-- file: setup-apps.md
-- file: modules.md
-- file: venv.md
-- file: conda-forge.md
-- file: contributing.md
diff --git a/book/aliases.md b/book/aliases.md
deleted file mode 100644
index 2f2d73f0403331548e5b365c24efab79ebde6fff..0000000000000000000000000000000000000000
--- a/book/aliases.md
+++ /dev/null
@@ -1,18 +0,0 @@
-# Setup useful aliases
-
-This is very useful to create few aliases, which can be done by adding in the file
-`~/.bash_aliases` lines like these ones:
-
-```sh
-alias sshcl1f001='ssh -X cl1f001'
-alias sshnrj1sv224='ssh -X nrj1sv224'
-alias sshnrj1sv223='ssh -X nrj1sv223'
-```
-
-On the LEGI cluster, one can also have:
-
-```sh
-alias oarsub-inter2cores='oarsub -I -l /core=2'
-alias oarsub-inter4cores='oarsub -I -l /core=4'
-alias oarsub-inter8cores='oarsub -I -l /core=8'
-```
diff --git a/book/conda-forge.md b/book/conda-forge.md
deleted file mode 100644
index 474e9b39da194272845d9103bc71eaaa8a3a6d15..0000000000000000000000000000000000000000
--- a/book/conda-forge.md
+++ /dev/null
@@ -1,3 +0,0 @@
-# Use conda-forge packages and environments with conda and mamba
-
-...
diff --git a/book/contributing.md b/book/contributing.md
deleted file mode 120000
index 44fcc63439371c8c829df00eec6aedbdc4d0e4cd..0000000000000000000000000000000000000000
--- a/book/contributing.md
+++ /dev/null
@@ -1 +0,0 @@
-../CONTRIBUTING.md
\ No newline at end of file
diff --git a/book/intro.md b/book/intro.md
deleted file mode 100644
index 5221b3e442dcbdb0fcf5ba68a7009624de90a04e..0000000000000000000000000000000000000000
--- a/book/intro.md
+++ /dev/null
@@ -1,50 +0,0 @@
-# How to use Python at LEGI
-
-This is a small introduction on how to use Python at LEGI. We first focus on what can be
-done on the machines running Debian and in particular Debian 11 (Bullseye), which is the
-version used in summer 2024 on the LEGI clusters.
-
-```{admonition} Note for LEGI
-
-It is common when using this website to copy commands from this site and to paste them in
-a terminal. Copy/pasting connection does not always work well with x2go (the remote desktop
-software used to connect to the LEGI cluster). Therefore, if you need to copy/paste commands,
-we advice to open this website from a browser launched in the x2go session. Alternatively,
-one can just open a local terminal and connect to the cluster with a simple ssh command.
-
-```
-
-On Linux, it is often reasonable to use the Python provided by the system
-(`/usr/bin/python3`). On Debian 11, `python3` corresponds to Python 3.11.2, which is still
-in 2024 a good version to be used for developing and computing.
-
-```{note}
-
-Yes, Python 3.9 is a bit outdated in 2024. The LEGI cluster is running on Debian 11
-which is nowadays the "old stable" version. The cluster will soon be updated to Debian 12
-(nowadays "Debian stable"), which comes with Python 3.11. In case you need a newer Python
-version or other implementations (like PyPy), you can install them with Conda/Mamba/Pixi
-(see [our documentation on conda-forge](./conda-forge.md)) or with
-[pyenv](https://github.com/pyenv/pyenv).
-
-```
-
-One of the most simple way to use Python at LEGI is to activate (for example with
-`module load python/3.11.2`) the big "read-only" virtual environment created with the
-repository
-[softsync-python-debian12](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12).
-This possibility is described in detailed [here](./modules.md).
-
-At LEGI, the Debian package `python3-venv` is installed so one can create virtual
-environments as explained [here](./venv.md).
-
-The Debian package `python3-pip` is also installed so one can install packages seen by
-the system packages (in `~/.local/lib/python3.9`). However, for most tasks, this practice
-is not recommended. We will only use this possibility to install
-[pipx](https://github.com/pypa/pipx), which can be used to
-[install useful applications](./setup-apps.md).
-
-## Table of contents
-
-```{tableofcontents}
-```
diff --git a/book/logo_LEGI.jpg b/book/logo_LEGI.jpg
deleted file mode 100755
index 77f1cb81a97cf756f131cac1b62a40c4c6b2375f..0000000000000000000000000000000000000000
Binary files a/book/logo_LEGI.jpg and /dev/null differ
diff --git a/book/modules.md b/book/modules.md
deleted file mode 100644
index 56212d49bc9b694b0152cf514b6547da97a9d034..0000000000000000000000000000000000000000
--- a/book/modules.md
+++ /dev/null
@@ -1,111 +0,0 @@
-# LEGI Python module
-
-We consider here the module based on the system Python 3 provided by Debian
-(`/usr/bin/python3`). The exact version depends on the Debian version (3.11.2 for Debian
-11 and 3.11.2 for Debian 12).
-
-This module is a "read-only" virtual environment based on `/usr/bin/python3` containing a
-selection of packages useful for fluid mechanics. The module is updated when needed so
-that the packages are up-to-date. The module is tested for simple things (like using
-Numpy, Pandas, Matplotlib as they should be used in 2024), so these simple things should
-always work. If one needs more stability, one should use [other tools](./intro.md).
-
-These virtual environments are created by the computer department of the lab and **cannot
-be modified by the users** (`pip install ...` does not work), meaning that all users
-should have the same experience. However, it is still possible to modify this module by
-using the virtual environment `PYTHONPATH`, but this is not recommended.
-
-## Activate and deactivate the module
-
-One can use the `module` command. On Debian 11, one should do:
-
-```sh
-module load python/3.11.2
-```
-
-Deactivating the module can be done with `module unload python`.
-
-The modules are actually real virtual environments so that one can also activate them by
-sourcing the activate script
-
-```sh
-. /opt/python/3.11.2/bin/activate
-```
-
-In this case, deactivating it can be done with `deactivate`.
-
-## Create a small virtual environment based on the Python module
-
-You can create a small virtual environment (see [our page on virtual env](./venv.md))
-from the Python module with something like:
-
-```sh
-module load python/3.11.2
-python -m venv my_venv --system-site-packages
-. my_venv/bin/activate
-pip install PyFoam
-```
-
-## Use an older version of this module
-
-If some scripts stopped working after an update of the module,
-[please, fill an issue in this repo](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12/-/issues).
-
-However, it is simple to exactly recreate an older version of this module. First
-[install the applications used for developping this module](./setup-apps.md). Then, you
-should be able to clone the repo with
-
-```sh
-cd ~
-hg clone https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12
-```
-
-To recreate an old version, one should run something like
-
-```sh
-cd ~/softsync-python-debian12
-# get all new commits
-hg pull
-# study which version you want (look at the dates)
-hg lg
-# update the code (in particular the lockfile) to a specific version
-hg update 49
-# this creates the virtual environment
-make
-```
-
-The environment can then be activated with
-
-```sh
-. ~/softsync-python-debian12/.venv
-```
-
-## What if this module is not sufficient for you needs
-
-The Python modules are defined and created with
-[this repository](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12).
-If you encounter a problem, create an issue
-[here](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12/-/issues).
-
-Note that the purpose of this module is to **simplify the use of Python for simple
-cases**. There are [other tools for other needs](./intro.md).
-
-- If you need another Python application, you can try to
- [install it with pipx](./setup-apps.md).
-
-- If you need another Python library that can be useful for other people at LEGI, it can
- be included in the official Python module.
- [Please, fill an issue in this repo](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12/-/issues).
-
-- If you need another version of a Python library installed in this module, the module
- can be updated.
- [Please, fill an issue in this repo](https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12/-/issues).
- You can also [create a dedicated virtual environment](./venv.md).
-
-- If you need another Python library that is not mainstream for fluid mechanics,
- [create a dedicated virtual environment](./venv.md) or
- [install it with conda-forge](./conda-forge.md).
-
-- If you need another version of Python or another Python implementations (for example
- PyPy), you can use [conda/mamba](./conda-forge.md) or
- [pyenv](https://github.com/pyenv/pyenv).
diff --git a/book/setup-apps.md b/book/setup-apps.md
deleted file mode 100644
index 98111e34451d157a06c709cd8ee6f65e1e77cbec..0000000000000000000000000000000000000000
--- a/book/setup-apps.md
+++ /dev/null
@@ -1,102 +0,0 @@
-# Install and setup useful applications with pipx
-
-It is good to install globally few applications useful for developing with Python. We
-will show here how it can be done with [pipx](https://github.com/pypa/pipx).
-
-```{note}
-
-Pipx installs applications in isolated and dedicated virtual environments, and it is
-completely transparent for the users.
-
-```
-
-## Install pipx
-
-One first needs to install pipx itself. On Debian (and other Linux distributions), one
-can run:
-
-```sh
-python3 -m pip install pipx
-~/.local/bin/pipx ensurepath
-```
-
-## Install and setup Mercurial
-
-We start by installing [Mercurial], which is a version control application (like Git, but
-easier and safer) and which can be used to interact with Git repositories hosted on
-Github or on Gitlab instances:
-
-```sh
-pipx install mercurial
-pipx inject mercurial hg-git hg-evolve hg-fluiddyn
-```
-
-You need a file `~/.hgrc` containing something like
-[this file](https://foss.heptapod.net/fluiddyn/fluiddyn/-/raw/branch/default/doc/hgrc).
-It can be downloaded with:
-
-```sh
-wget https://foss.heptapod.net/fluiddyn/fluiddyn/-/raw/branch/default/doc/hgrc -O ~/.hgrc
-```
-
-````{admonition} Command wget not found?
----
-class: dropdown
----
-You might be more lucky with the equivalent command with `curl`:
-
-```bash
-curl -L https://foss.heptapod.net/fluiddyn/fluiddyn/-/raw/branch/default/doc/hgrc -o ~/.hgrc
-```
-````
-
-```{warning}
-You should now have a file `~/.hgrc` in your home directory.
-**Modify it as explained in the file** (change the username and the email address).
-```
-
-You can check that Mercurial is correctly setup with
-
-```sh
-hg version -v
-```
-
-When everything is fine, you should be able to clone Git repos with something like:
-
-```sh
-hg clone https://gricad-gitlab.univ-grenoble-alpes.fr/legi/soft/trokata/softsync-python-debian12.git
-```
-
-or, alternatively and better, but you need to setup a SSH key on
-<https://gricad-gitlab.univ-grenoble-alpes.fr/-/user_settings/ssh_keys> (take time to do
-this since it is really useful!).
-
-```sh
-hg clone git@gricad-gitlab.univ-grenoble-alpes.fr:legi/soft/trokata/softsync-python-debian12.git
-```
-
-## Install and setup xonsh
-
-```sh
-# a shell much user friendly that bash
-pipx install 'xonsh[full]'
-pipx inject xonsh xontrib-vox
-```
-
-One can setup xonsh by running `xonfig web` and then adding the line
-`xontrib load coreutils vox` in the file `~/.xonshrc`.
-
-## Install PDM, Nox and mdformat
-
-Finally, let's add few other applications with pipx:
-
-```sh
-# https://pdm-project.org
-pipx install pdm
-pipx install nox
-pipx install mdformat
-pipx inject mdformat mdformat-myst
-pipx install pypi-timemachine
-```
-
-[mercurial]: https://www.mercurial-scm.org/
diff --git a/book/venv.md b/book/venv.md
deleted file mode 100644
index bfe4eff513b53a0f96190439b283d366a4737448..0000000000000000000000000000000000000000
--- a/book/venv.md
+++ /dev/null
@@ -1,27 +0,0 @@
-# Create and use virtual environments
-
-This page is about standard Python environments. Note that one can also
-[create conda environment with conda/mamba/pixi](./conda-forge.md).
-
-## With `venv`
-
-See the official Python documentation on
-[Installing using pip in virtual environments](https://packaging.python.org/en/latest/guides/installing-using-pip-and-virtual-environments/).
-
-````{admonition} Note for LEGI
-
-You can create a virtual environment from the LEGI Python module with something like:
-
-```sh
-module load python/3.11.2
-python -m venv my_venv --system-site-packages
-. my_venv/bin/activate
-pip install PyFoam
-```
-
-````
-
-## With PDM
-
-It is useful to better control our virtual environments. A good tool to do that in 2024
-is [PDM](https://pdm-project.org).
diff --git a/docker/Dockerfile b/docker/Dockerfile
index eb50c710ea3f10c7a268389cb33bc8306f97ccc0..95451b6bc830c9c3b777d8b15b04f2419080a867 100644
--- a/docker/Dockerfile
+++ b/docker/Dockerfile
@@ -1,4 +1,4 @@
-FROM debian:bullseye
+FROM debian:bookworm
LABEL Pierre Augier <pierre.augier@univ-grenoble-alpes.fr>
RUN apt-get update
diff --git a/pdm.lock b/pdm.lock
index 9d45d7c2c12460cc5511f99fb53bd0925e61bcd6..e4161426027b218b683413d2ede2609eb8ac1ef2 100644
--- a/pdm.lock
+++ b/pdm.lock
@@ -5,23 +5,21 @@
groups = ["default"]
strategy = ["cross_platform", "inherit_metadata"]
lock_version = "4.4.1"
-content_hash = "sha256:d21331ea5144eea158ff92e73f8025b7bd107f2efd95460f5172d9ce3d79b056"
+content_hash = "sha256:f8256011e4bc09590f2ea72cec476e73388a2e69fbe4a187f15c5cb8b0548960"
[[package]]
name = "anyio"
-version = "4.3.0"
+version = "4.4.0"
requires_python = ">=3.8"
summary = "High level compatibility layer for multiple asynchronous event loop implementations"
groups = ["default"]
dependencies = [
- "exceptiongroup>=1.0.2; python_version < \"3.11\"",
"idna>=2.8",
"sniffio>=1.1",
- "typing-extensions>=4.1; python_version < \"3.11\"",
]
files = [
- {file = "anyio-4.3.0-py3-none-any.whl", hash = "sha256:048e05d0f6caeed70d731f3db756d35dcc1f35747c8c403364a8332c630441b8"},
- {file = "anyio-4.3.0.tar.gz", hash = "sha256:f75253795a87df48568485fd18cdd2a3fa5c4f7c5be8e5e36637733fce06fed6"},
+ {file = "anyio-4.4.0-py3-none-any.whl", hash = "sha256:c1b2d8f46a8a812513012e1107cb0e68c17159a7a594208005a57dc776e1bdc7"},
+ {file = "anyio-4.4.0.tar.gz", hash = "sha256:5aadc6a1bbb7cdb0bede386cac5e2940f5e2ff3aa20277e991cf028e0585ce94"},
]
[[package]]
@@ -100,16 +98,13 @@ files = [
[[package]]
name = "astroid"
-version = "3.2.0"
+version = "3.2.2"
requires_python = ">=3.8.0"
summary = "An abstract syntax tree for Python with inference support."
groups = ["default"]
-dependencies = [
- "typing-extensions>=4.0.0; python_version < \"3.11\"",
-]
files = [
- {file = "astroid-3.2.0-py3-none-any.whl", hash = "sha256:16ee8ca5c75ac828783028cc1f967777f0e507c6886a295ad143e0f405b975a2"},
- {file = "astroid-3.2.0.tar.gz", hash = "sha256:f7f829f8506ade59f1b3c6c93d8fac5b1ebc721685fa9af23e9794daf1d450a3"},
+ {file = "astroid-3.2.2-py3-none-any.whl", hash = "sha256:e8a0083b4bb28fcffb6207a3bfc9e5d0a68be951dd7e336d5dcf639c682388c0"},
+ {file = "astroid-3.2.2.tar.gz", hash = "sha256:8ead48e31b92b2e217b6c9733a21afafe479d52d6e164dd25fb1a770c7c3cf94"},
]
[[package]]
@@ -131,9 +126,6 @@ version = "2.0.4"
requires_python = ">=3.8"
summary = "Simple LRU cache for asyncio"
groups = ["default"]
-dependencies = [
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groups = ["default"]
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requires_python = ">=3.9"
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-version = "1.13.0"
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requires_python = ">=3.9"
summary = "Fundamental algorithms for scientific computing in Python"
groups = ["default"]
@@ -2751,13 +2701,13 @@ dependencies = [
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]
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[[package]]
@@ -2789,26 +2739,26 @@ files = [
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name = "setuptools"
-version = "69.5.1"
+version = "70.0.0"
requires_python = ">=3.8"
summary = "Easily download, build, install, upgrade, and uninstall Python packages"
groups = ["default"]
files = [
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[[package]]
name = "shiboken6"
-version = "6.7.0"
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requires_python = "<3.13,>=3.9"
summary = "Python/C++ bindings helper module"
groups = ["default"]
files = [
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[[package]]
@@ -2914,26 +2864,27 @@ dependencies = [
"scipy!=1.9.2,>=1.8",
]
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[[package]]
name = "sympy"
-version = "1.12"
+version = "1.12.1"
requires_python = ">=3.8"
summary = "Computer algebra system (CAS) in Python"
groups = ["default"]
dependencies = [
- "mpmath>=0.19",
+ "mpmath<1.4.0,>=1.1.0",
]
files = [
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]
[[package]]
@@ -2964,7 +2915,7 @@ files = [
[[package]]
name = "textual"
-version = "0.60.0"
+version = "0.65.1"
requires_python = "<4.0,>=3.8"
summary = "Modern Text User Interface framework"
groups = ["default"]
@@ -2974,8 +2925,8 @@ dependencies = [
"typing-extensions<5.0.0,>=4.4.0",
]
files = [
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]
[[package]]
@@ -2991,7 +2942,7 @@ files = [
[[package]]
name = "tifffile"
-version = "2024.5.10"
+version = "2024.5.22"
requires_python = ">=3.9"
summary = "Read and write TIFF files"
groups = ["default"]
@@ -2999,8 +2950,8 @@ dependencies = [
"numpy",
]
files = [
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[[package]]
@@ -3017,18 +2968,6 @@ files = [
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]
-[[package]]
-name = "tomli"
-version = "2.0.1"
-requires_python = ">=3.7"
-summary = "A lil' TOML parser"
-groups = ["default"]
-marker = "python_version < \"3.11\""
-files = [
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-]
-
[[package]]
name = "tomlkit"
version = "0.12.5"
@@ -3101,22 +3040,21 @@ files = [
[[package]]
name = "trio"
-version = "0.25.0"
+version = "0.25.1"
requires_python = ">=3.8"
summary = "A friendly Python library for async concurrency and I/O"
groups = ["default"]
dependencies = [
"attrs>=23.2.0",
"cffi>=1.14; os_name == \"nt\" and implementation_name != \"pypy\"",
- "exceptiongroup; python_version < \"3.11\"",
"idna",
"outcome",
"sniffio>=1.3.0",
"sortedcontainers",
]
files = [
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[[package]]
@@ -3132,13 +3070,13 @@ files = [
[[package]]
name = "typing-extensions"
-version = "4.11.0"
+version = "4.12.1"
requires_python = ">=3.8"
summary = "Backported and Experimental Type Hints for Python 3.8+"
groups = ["default"]
files = [
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]
[[package]]
@@ -3213,13 +3151,13 @@ files = [
[[package]]
name = "webcolors"
-version = "1.13"
-requires_python = ">=3.7"
+version = "24.6.0"
+requires_python = ">=3.8"
summary = "A library for working with the color formats defined by HTML and CSS."
groups = ["default"]
files = [
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]
[[package]]
@@ -3261,12 +3199,12 @@ files = [
[[package]]
name = "zipp"
-version = "3.18.1"
+version = "3.19.2"
requires_python = ">=3.8"
summary = "Backport of pathlib-compatible object wrapper for zip files"
groups = ["default"]
marker = "python_version < \"3.12\""
files = [
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diff --git a/pyproject.toml b/pyproject.toml
index af0e0fee602ac9d23101b4312f208cfd2f419a06..0f9238f81d8b5fd3bdf27aeed7d1079ec9f92d00 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,7 +1,7 @@
[project]
name = "softsync-python-debian12"
version = "0.1.0"
-description = "Source to create a Python module on Debian 11"
+description = "Source to create a Python module on Debian 12"
authors = [
{name = "pierre.augier", email = "pierre.augier@univ-grenoble-alpes.fr"},
]
@@ -57,7 +57,7 @@ dependencies = [
"fluidfft",
"formattex",
]
-requires-python = "==3.9.*"
+requires-python = "==3.11.*"
readme = "README.md"
license = {text = "MIT"}