CamiTK Community Edition issueshttps://gricad-gitlab.univ-grenoble-alpes.fr/CamiTK/CamiTK/-/issues2023-10-26T16:58:56+02:00https://gricad-gitlab.univ-grenoble-alpes.fr/CamiTK/CamiTK/-/issues/167ITK Registration Action2023-10-26T16:58:56+02:00Celine FouardITK Registration Action| | |
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| **As a** | CamiTK User / Student |
| **I would like to** | Use basic registration technics to align 2 images |
| **So that** | I could visualize registration results directly on CamiTK |
| **Epic/Topics** | Integrate ITK ...| | |
|--|--|
| **As a** | CamiTK User / Student |
| **I would like to** | Use basic registration technics to align 2 images |
| **So that** | I could visualize registration results directly on CamiTK |
| **Epic/Topics** | Integrate ITK Registration into CamiTK |
## Description / Overview
Select mandatory registration parameters on an Action interface. Apply registration
## Acceptance tests
[Please enter acceptance tests as TODOs. Acceptance test explains how to test that this issue is solved]
- [ ] [Test 1]
- [ ] [Test 2]
- [ ] [...]
## Track
[Please keep only one of the following label]
## Misc
- Automatic subscription of issue creator:
**If appropriate, do not forget to mark this issue as "confidential"** by checking the corresponding tick box belowCeline FouardCeline Fouardhttps://gricad-gitlab.univ-grenoble-alpes.fr/CamiTK/CamiTK/-/issues/36Interface Data2018-06-13T10:41:45+02:00Emmanuel PromayonInterface Data| | |
|--|--|
| **As a** | CEP developer |
| **I would like to** | add easily manipulate array of data (values, signals, vectors...) to any type of component (not MeshComponent nor ImageComponent) |
| **So that** | I can visualize/inter...| | |
|--|--|
| **As a** | CEP developer |
| **I would like to** | add easily manipulate array of data (values, signals, vectors...) to any type of component (not MeshComponent nor ImageComponent) |
| **So that** | I can visualize/interact data as colors on a mesh, as graph/curve |
| **Epic/Topics** | Interface Data |
## Description / Overview
The epic is called "Interface Data" or how to include 1D temporal signal in CamiTK.
This is a new facet for `Component` that enables storage, manipulation, visualization and interaction with/of array of data. The idea is to offer data abstraction and minimal default behaviour for signal and temporal values.
In the design stage, first check:
- Check the Pulse project to check how they store the signals
- Check the work done by Nico (see `incubator-local/respirm` CEP) in order to handle 1D signal and their representation using a dedicated viewer based on vtkChart library (and some action to process them). In particular check the viewer and the defined actions.
- Check open-source application that help manipulate data and display charts to deduce best practices
- Check for standard in signal processing data format and processing library (if any)
One idea would be to be able to use a python interface/shell/script in order to process the signal directly from a console...
## Hints
As for any creation of interface in CamiTK, this can be done following these steps:
- Create a new interface that add the management of a list of `vtkDataArray` in `Component`
- Create the corresponding helper class
- Create the corresponding viewer (using vtkChart and the possibility to add data as if it was a live physiological signal) and integrate it to camitk-imp
- Create another viewer to display data in a table/spreadsheet
- Take into account the fact that `MeshComponent` can project the data as colors
- move addPointData/addCellData in `InterfaceGeometry` or to the new `InterfaceData` interface (may be use an enum for `FREE`, `ATTACHED_TO_CELLS`, `ATTACHED_TO_POINTS` etc...
## Acceptance tests
- [ ] a new tutorial component that shows how to add/remove/show these data in the new viewer
- [ ] a new tutorial MeshComponent that shows how data can be displayed directly _on_ the mesh surface
- [ ] a new tutorial that shows generates random value based on a sinus function to show how update/acquisition can be done
## Track
/label ~"Track Technology Integration"